C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2D 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019927 Ube2d1 10090 - 10:71254980-71285262 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020085 Ube2d1-001 71254980-71285262 protein_coding
  ENSMUST00000144231 Ube2d1-002 71257705-71285218 retained_intron
  ENSMUST00000144636 Ube2d1-003 71255659-71256888 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020085ENSMUST00000144231ENSMUST00000144636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020085 14.077±5.21 4.618±2.93 30.273±7.24 56.076±38.98 18.009±5.54 5.828±2.62 22.290±2.14 11.611±1.28 5.560±1.18 11.338±1.25 116.323±8.49 13.139±5.84 6.259±3.55 2.743±1.22
ENSMUST00000144231 1.861±0.00 1.367±0.14 1.982±0.52 4.371±2.84 2.013±0.77 0.988±0.00 N/A N/A 0.458±0.10 1.420±0.44 N/A 1.937±0.82 0.282±0.15 0.225±0.11
ENSMUST00000144636 8.139±0.00 8.440±0.96 N/A N/A 12.358±1.91 7.938±1.44 N/A N/A N/A 9.392±0.70 N/A 14.026±3.22 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000209 ISS protein polyubiquitination
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 ISS cytoplasm
GO:0006511 ISS ubiquitin-dependent protein catabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031398 ISS positive regulation of protein ubiquitination
GO:0043234 ISO protein complex
GO:0070936 IEA protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038576 ube2d1b ubiquitin-conjugating enzyme E2D 1b protein_coding Danio_rerio
ENSG00000072401 UBE2D1 ubiquitin-conjugating enzyme E2D 1 protein_coding Homo_sapiens

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