C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Abelson helper integration site 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019986 Ahi1 10090 + 10:20952547-21080428 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105525 Ahi1-201 20952547-21080428 protein_coding
  ENSMUST00000163505 Ahi1-202 21040820-21080428 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105525ENSMUST00000163505
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105525 1.230±0.56 2.589±0.43 1.306±0.05 24.561±4.18 0.780±0.09 0.677±0.09 0.349±0.08 1.354±0.17 0.957±0.93 1.207±0.25 0.134±0.03 1.971±0.73 0.797±0.16 27.290±5.89
ENSMUST00000163505 N/A N/A 1.651±0.00 17.135±3.43 N/A 0.577±0.18 N/A N/A 0.450±0.41 N/A 0.135±0.06 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005911 IEA cell-cell junction
GO:0005912 IEA adherens junction
GO:0006903 IMP vesicle targeting
GO:0010628 IMP positive regulation of gene expression
GO:0016192 IMP vesicle-mediated transport
GO:0031513 IDA nonmotile primary cilium
GO:0033365 IMP protein localization to organelle
GO:0035845 IMP photoreceptor cell outer segment organization
GO:0036038 IDA TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042802 IEA identical protein binding
GO:0060041 IMP retina development in camera-type eye
GO:0060271 IMP cilium morphogenesis
GO:0072372 IEA primary cilium

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044056 ahi1 Abelson helper integration site 1 protein_coding Danio_rerio
ENSG00000135541 AHI1 Abelson helper integration site 1 protein_coding Homo_sapiens

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