C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Abelson helper integration site 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105525 Ahi1-201 ENSMUSG00000019986 10090 + 10:20952547-21080428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105525 1.230±0.56 2.589±0.43 1.306±0.05 24.561±4.18 0.780±0.09 0.677±0.09 0.349±0.08 1.354±0.17 0.957±0.93 1.207±0.25 0.134±0.03 1.971±0.73 0.797±0.16 27.290±5.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AJ CIL_0009AJ_0002 VISTA 10:20781770-21384133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005814 IDA centriole
GO:0005911 IEA cell-cell junction
GO:0005912 IEA adherens junction
GO:0006903 IMP vesicle targeting
GO:0010628 IMP positive regulation of gene expression
GO:0016192 IMP vesicle-mediated transport
GO:0031513 IDA nonmotile primary cilium
GO:0033365 IMP protein localization to organelle
GO:0035845 IMP photoreceptor cell outer segment organization
GO:0036038 IDA TCTN-B9D complex
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042802 IEA identical protein binding
GO:0060041 IMP retina development in camera-type eye
GO:0060271 IMP cilium morphogenesis
GO:0072372 IEA primary cilium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265602 AHI1-011 protein_coding Homo_sapiens 0 2501
ENST00000327035 AHI1-003 protein_coding Homo_sapiens 0 2187
ENST00000367799 AHI1-001 protein_coding Homo_sapiens 0 1773
ENST00000367800 AHI1-008 protein_coding Homo_sapiens 0 2501
ENST00000457866 AHI1-009 protein_coding Homo_sapiens 0 2501
ENST00000475846 AHI1-002 nonsense_mediated_decay Homo_sapiens 0 1450
ENST00000529865 AHI1-016 protein_coding Homo_sapiens 0 230
ENST00000531788 AHI1-010 nonsense_mediated_decay Homo_sapiens 0 1014

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