C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial calcium uptake 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020111 Micu1 10090 + 10:59702477-59864132 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020311 Micu1-005 59702599-59864130 protein_coding
  ENSMUST00000092508 Micu1-004 59702628-59864123 protein_coding
  ENSMUST00000165405 Micu1-003 59702658-59751705 retained_intron
  ENSMUST00000165563 Micu1-001 59702477-59864132 protein_coding
  ENSMUST00000166565 Micu1-011 59861518-59863403 retained_intron
  ENSMUST00000167612 Micu1-008 59740774-59757174 protein_coding
  ENSMUST00000167872 Micu1-002 59702563-59744896 retained_intron
  ENSMUST00000169842 Micu1-010 59827221-59840367 retained_intron
  ENSMUST00000170952 Micu1-007 59740084-59740758 processed_transcript
  ENSMUST00000171409 Micu1-006 59702649-59788938 protein_coding
  ENSMUST00000172034 Micu1-009 59762413-59789036 processed_transcript
  ENSMUST00000179709 Micu1-201 59702618-59864130 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020311ENSMUST00000092508ENSMUST00000165563ENSMUST00000171409ENSMUST00000179709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020311 7.009±3.52 14.726±6.30 N/A 10.780±7.78 12.906±1.27 22.594±4.18 1.152±0.54 15.824±5.91 3.274±1.01 15.213±0.60 N/A 8.370±3.79 10.233±1.52 2.188±0.49
ENSMUST00000092508 6.875±1.20 N/A N/A 5.240±0.31 6.845±2.29 N/A 1.366±0.00 N/A 3.117±0.34 N/A 17.766±1.98 10.177±2.81 4.497±0.84 0.700±0.00
ENSMUST00000165563 9.292±1.84 11.159±3.00 35.866±1.52 12.286±3.52 7.228±0.77 23.226±4.77 4.461±1.26 11.880±4.67 13.239±2.79 15.157±0.93 3.639±0.82 9.615±3.35 21.163±2.90 4.282±1.91
ENSMUST00000171409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.789±0.00 24.101±4.83 3.698±0.00
ENSMUST00000179709 N/A N/A N/A 7.264±3.28 8.134±0.00 N/A 0.891±0.00 N/A 5.783±1.12 N/A N/A 5.602±1.27 5.485±1.07 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QA CIL_0008QA_0002 VISTA 10:59142760-59744333
CIL_0007VS CIL_0007VS_0002 VISTA 10:59667734-60271225

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005758 ISS mitochondrial intermembrane space
GO:0006851 ISS mitochondrial calcium ion transport
GO:0032592 ISS integral component of mitochondrial membrane
GO:0034704 IDA calcium channel complex
GO:0036444 IEA calcium ion transmembrane import into mitochondrion
GO:0042802 IEA identical protein binding
GO:0046982 IPI protein heterodimerization activity
GO:0051260 IEA protein homooligomerization
GO:0051560 ISS mitochondrial calcium ion homeostasis
GO:0051561 ISS positive regulation of mitochondrial calcium ion concentration
GO:0070509 ISS calcium ion import
GO:1990246 ISS uniplex complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063358 micu1 mitochondrial calcium uptake 1 protein_coding Danio_rerio
ENSG00000107745 MICU1 mitochondrial calcium uptake 1 protein_coding Homo_sapiens

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