C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial calcium uptake 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092508 Micu1-004 ENSMUSG00000020111 10090 + 10:59702628-59864123 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000092508
Transcript ID Adipose Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000092508 6.875±1.20 5.240±0.31 6.845±2.29 1.366±0.00 3.117±0.34 17.766±1.98 10.177±2.81 4.497±0.84 0.700±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QA CIL_0008QA_0002 VISTA 10:59142760-59744333
CIL_0007VS CIL_0007VS_0002 VISTA 10:59667734-60271225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005758 ISS mitochondrial intermembrane space
GO:0006851 ISS mitochondrial calcium ion transport
GO:0032592 ISS integral component of mitochondrial membrane
GO:0034704 IDA calcium channel complex
GO:0046982 IPI protein heterodimerization activity
GO:0051560 ISS mitochondrial calcium ion homeostasis
GO:0051561 ISS positive regulation of mitochondrial calcium ion concentration
GO:0070509 ISS calcium ion import
GO:1990246 ISS uniplex complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361114 MICU1-002 protein_coding Homo_sapiens 0 1570
ENST00000398761 MICU1-201 protein_coding Homo_sapiens 0 1604
ENST00000398763 MICU1-005 protein_coding Homo_sapiens 0 1007
ENST00000418483 MICU1-004 protein_coding Homo_sapiens 0 1007
ENST00000476605 MICU1-003 nonsense_mediated_decay Homo_sapiens 0 857
ENST00000489666 MICU1-012 protein_coding Homo_sapiens 0 532
ENST00000603011 MICU1-006 protein_coding Homo_sapiens 0 599
ENST00000603173 MICU1-009 processed_transcript Homo_sapiens 0 303
ENST00000604238 MICU1-010 protein_coding Homo_sapiens 0 481
ENST00000604529 MICU1-011 processed_transcript Homo_sapiens 0 254

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