C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain containing 82
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020257 Wdr82 10090 + 9:106170928-106191136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020490 Wdr82-001 106170928-106191136 protein_coding
  ENSMUST00000190564 Wdr82-002 106176677-106186502 nonsense_mediated_decay
  ENSMUST00000191147 Wdr82-003 106170929-106173973 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020490ENSMUST00000190564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020490 14.592±4.69 30.189±15.31 29.042±3.68 43.927±21.56 14.839±5.57 16.661±6.48 12.861±3.80 12.823±4.44 17.850±4.99 29.655±5.96 5.551±1.17 27.915±13.91 17.928±6.79 7.782±3.21
ENSMUST00000190564 N/A N/A N/A 22.143±0.00 N/A N/A N/A N/A N/A N/A N/A 128.833±0.00 66.939±16.82 4.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0035097 IEA histone methyltransferase complex
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0048188 IEA Set1C/COMPASS complex
GO:0051568 IMP histone H3-K4 methylation
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014083 wdr82 WD repeat domain containing 82 protein_coding Danio_rerio
ENSDARG00000094792 twf2a twinfilin, actin-binding protein, homolog 2a (Drosophila) protein_coding Danio_rerio
ENSG00000164091 WDR82 WD repeat domain 82 protein_coding Homo_sapiens

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