C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain containing 82
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020490 Wdr82-001 ENSMUSG00000020257 10090 + 9:106170928-106191136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020490 14.592±4.69 30.189±15.31 29.042±3.68 43.927±21.56 14.839±5.57 16.661±6.48 12.861±3.80 12.823±4.44 17.850±4.99 29.655±5.96 5.551±1.17 27.915±13.91 17.928±6.79 7.782±3.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 ISS chromatin
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0035097 IEA histone methyltransferase complex
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0048188 IEA Set1C/COMPASS complex
GO:0051568 IMP histone H3-K4 methylation
GO:0072357 ISS PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000007353 wdr82-001 protein_coding Danio_rerio 0 723
ENSDART00000007798 twf2a-201 protein_coding Danio_rerio 0 682
ENST00000296490 WDR82-001 protein_coding Homo_sapiens 0 2159
ENST00000439836 WDR82P1-001 processed_pseudogene Homo_sapiens 0 1164
ENST00000444540 RP11-47K11.2-001 processed_pseudogene Homo_sapiens 0 1053
ENST00000463624 WDR82-003 protein_coding Homo_sapiens 0 518
ENST00000469000 WDR82-004 protein_coding Homo_sapiens 0 627
ENST00000487402 WDR82-002 retained_intron Homo_sapiens 0 1661

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