C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxin 7-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020564 Atxn7l1 10090 + 12:33147693-33375659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077456 Atxn7l1-006 33147693-33251146 protein_coding
  ENSMUST00000090597 Atxn7l1-007 33302515-33368273 protein_coding
  ENSMUST00000110824 Atxn7l1-005 33147711-33251146 protein_coding
  ENSMUST00000125192 Atxn7l1-001 33147763-33375659 protein_coding
  ENSMUST00000126275 Atxn7l1-010 33345305-33368278 retained_intron
  ENSMUST00000130740 Atxn7l1-004 33147774-33326133 nonsense_mediated_decay
  ENSMUST00000133549 Atxn7l1-011 33314277-33344941 protein_coding
  ENSMUST00000136644 Atxn7l1-003 33147805-33328849 retained_intron
  ENSMUST00000142184 Atxn7l1-014 33367324-33373185 protein_coding
  ENSMUST00000144586 Atxn7l1-009 33314289-33328849 retained_intron
  ENSMUST00000145589 Atxn7l1-013 33315405-33326204 retained_intron
  ENSMUST00000146040 Atxn7l1-002 33147754-33373196 protein_coding
  ENSMUST00000154742 Atxn7l1-008 33315397-33372357 protein_coding
  ENSMUST00000155386 Atxn7l1-012 33314400-33326063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077456ENSMUST00000090597ENSMUST00000110824ENSMUST00000125192ENSMUST00000145589ENSMUST00000146040ENSMUST00000154742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077456 4.304±0.00 2.699±0.02 N/A N/A 3.699±0.27 2.596±0.33 N/A 2.271±0.29 2.823±1.10 N/A N/A 3.963±1.70 N/A N/A
ENSMUST00000090597 1.992±0.00 N/A N/A N/A N/A 0.993±0.00 N/A 1.130±0.00 1.699±0.69 N/A N/A N/A N/A 12.553±4.94
ENSMUST00000110824 8.509±3.06 7.335±1.31 4.536±2.14 9.739±5.31 8.748±1.89 7.380±0.76 5.539±0.94 5.122±0.98 3.674±1.58 12.217±4.73 5.443±0.36 8.548±2.59 5.380±0.84 6.269±0.00
ENSMUST00000125192 2.163±0.20 1.525±0.30 N/A 2.019±1.38 1.854±0.89 1.463±0.53 0.938±0.22 1.287±0.39 1.884±0.78 3.937±0.52 N/A 2.270±0.28 N/A N/A
ENSMUST00000145589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 82.627±6.82
ENSMUST00000146040 N/A N/A N/A N/A N/A N/A N/A N/A 1.709±0.00 N/A 1.069±0.00 1.667±0.11 1.139±0.00 4.968±1.68
ENSMUST00000154742 1.330±0.00 N/A 0.660±0.00 N/A 1.769±0.00 0.920±0.05 N/A N/A 1.357±0.26 N/A N/A 1.870±0.40 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089860 ATXN7L1 ataxin 7-like 1 protein_coding Danio_rerio
ENSG00000146776 ATXN7L1 ataxin 7-like 1 protein_coding Homo_sapiens

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