C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 7-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125192 Atxn7l1-001 ENSMUSG00000020564 10090 + 12:33147763-33375659 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000125192
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000125192 2.163±0.20 1.525±0.30 2.019±1.38 1.854±0.89 1.463±0.53 0.938±0.22 1.287±0.39 1.884±0.78 3.937±0.52 2.270±0.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290510 LEPREL2-002 protein_coding Homo_sapiens 0.0002 53
ENST00000318724 ATXN7L1-001 protein_coding Homo_sapiens 0 532
ENST00000388807 ATXN7L1-201 protein_coding Homo_sapiens 0 1424
ENST00000419735 ATXN7L1-002 protein_coding Homo_sapiens 0 3539
ENST00000464874 ATXN7L1-005 processed_transcript Homo_sapiens 0 388
ENST00000472195 ATXN7L1-012 protein_coding Homo_sapiens 0 2813
ENST00000472910 ATXN7L1-009 processed_transcript Homo_sapiens 0 998
ENST00000474433 ATXN7L1-007 nonsense_mediated_decay Homo_sapiens 0 2538
ENST00000477775 ATXN7L1-008 protein_coding Homo_sapiens 0 3000
ENST00000478915 ATXN7L1-004 protein_coding Homo_sapiens 1.00053e-42 178
ENST00000481880 ATXN7L1-003 retained_intron Homo_sapiens 0 527
ENST00000484475 ATXN7L1-011 protein_coding Homo_sapiens 0 1391
ENST00000485652 ATXN7L1-006 processed_transcript Homo_sapiens 0 636
ENST00000536140 LEPREL2-001 retained_intron Homo_sapiens 0.0002 53
ENST00000612048 LEPREL2-003 retained_intron Homo_sapiens 0.0001 53

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