C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB37, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020732 Rab37 10090 + 11:115091431-115162236 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021076 Rab37-003 115154157-115162236 protein_coding
  ENSMUST00000067754 Rab37-001 115091431-115162236 protein_coding
  ENSMUST00000131046 Rab37-002 115091431-115148647 retained_intron
  ENSMUST00000156383 Rab37-004 115154203-115157549 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021076ENSMUST00000067754ENSMUST00000131046ENSMUST00000156383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021076 0.515±0.02 0.171±0.06 0.324±0.03 0.864±0.81 2.237±0.59 2.053±0.31 0.405±0.16 0.397±0.18 0.886±0.77 0.540±0.11 0.128±0.10 1.241±0.41 0.236±0.18 0.035±0.02
ENSMUST00000067754 N/A 0.109±0.05 N/A 0.453±0.00 N/A 0.218±0.00 N/A N/A N/A N/A N/A 0.278±0.12 N/A N/A
ENSMUST00000131046 N/A 0.052±0.02 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A 0.010±0.00 0.022±0.01
ENSMUST00000156383 N/A 0.202±0.00 N/A N/A N/A N/A N/A 0.105±0.00 N/A N/A 0.192±0.05 1.090±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000I9 CIL_0000I9_0002 CGP 11:115051917-115162236
CIL_000328 CIL_000328_0002 CGP 11:115091431-115162236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0006184 ISS GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0030141 IDA secretory granule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068083 RAB37 RAB37, member RAS oncogene family protein_coding Danio_rerio
ENSG00000172794 RAB37 RAB37, member RAS oncogene family protein_coding Homo_sapiens

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