C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB37, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021076 Rab37-003 ENSMUSG00000020732 10090 + 11:115154157-115162236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021076
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021076 0.515±0.02 0.171±0.06 0.324±0.03 0.864±0.81 2.237±0.59 2.053±0.31 0.405±0.16 0.397±0.18 0.886±0.77 0.540±0.11 0.128±0.10 1.241±0.41 0.236±0.18 0.035±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000I9 CIL_0000I9_0002 CGP 11:115051917-115162236
CIL_000328 CIL_000328_0002 CGP 11:115091431-115162236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0006184 ISS GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0030141 IDA secretory granule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340415 RAB37-005 protein_coding Homo_sapiens 2e-35 156
ENST00000392610 RAB37-002 protein_coding Homo_sapiens 0 712
ENST00000392612 RAB37-006 protein_coding Homo_sapiens 0 571
ENST00000392613 RAB37-001 protein_coding Homo_sapiens 0 859
ENST00000392614 RAB37-007 protein_coding Homo_sapiens 0 761
ENST00000392615 RAB37-004 protein_coding Homo_sapiens 0 571
ENST00000392617 RAB37-003 retained_intron Homo_sapiens 2e-35 156
ENST00000402449 RAB37-015 protein_coding Homo_sapiens 0 580
ENST00000481224 RAB37-010 nonsense_mediated_decay Homo_sapiens 0 845
ENST00000488977 RAB37-009 retained_intron Homo_sapiens 0 307
ENST00000528438 RAB37-011 protein_coding Homo_sapiens 0 761
ENST00000531420 RAB37-014 retained_intron Homo_sapiens 1e-34 150
ENST00000533530 RAB37-013 retained_intron Homo_sapiens 0 558
ENST00000613645 RAB37-201 protein_coding Homo_sapiens 0 845

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