C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin, heavy polypeptide 10, non-muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020900 Myh10 10090 + 11:68691559-68816632 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018887 Myh10-002 68692112-68816612 protein_coding
  ENSMUST00000092984 Myh10-008 68692316-68816624 protein_coding
  ENSMUST00000102611 Myh10-001 68691915-68816632 protein_coding
  ENSMUST00000108673 Myh10-006 68692081-68746483 protein_coding
  ENSMUST00000124006 Myh10-005 68811427-68813019 processed_transcript
  ENSMUST00000139059 Myh10-003 68814362-68816544 processed_transcript
  ENSMUST00000141558 Myh10-009 68691559-68699259 processed_transcript
  ENSMUST00000143032 Myh10-007 68692078-68699418 processed_transcript
  ENSMUST00000145408 Myh10-004 68783432-68790239 processed_transcript
  ENSMUST00000155765 Myh10-010 68692154-68769643 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018887ENSMUST00000092984ENSMUST00000102611ENSMUST00000139059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.969±0.00
ENSMUST00000092984 N/A 1.015±0.00 N/A N/A N/A 0.602±0.26 N/A N/A 0.310±0.06 N/A N/A 3.610±0.00 N/A 2.490±0.04
ENSMUST00000102611 6.345±4.85 0.705±0.22 9.802±0.45 21.474±5.47 1.212±0.38 0.951±0.36 2.662±0.41 3.734±0.95 5.091±4.98 17.655±2.42 2.889±1.07 12.275±15.24 9.191±5.86 8.525±4.62
ENSMUST00000139059 16.550±9.54 6.363±0.96 16.225±1.31 36.038±3.72 5.918±0.63 3.431±0.92 4.113±1.18 10.105±0.56 5.363±5.15 38.166±0.72 1.325±0.08 21.340±6.61 7.483±1.49 6.826±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0000281 IMP mitotic cytokinesis
GO:0001701 IMP in utero embryonic development
GO:0001725 IDA stress fiber
GO:0001764 IMP neuron migration
GO:0001778 IMP plasma membrane repair
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005938 IDA cell cortex
GO:0006200 IEA ATP catabolic process
GO:0006887 IMP exocytosis
GO:0006930 IMP substrate-dependent cell migration, cell extension
GO:0007097 IMP nuclear migration
GO:0007155 IEA cell adhesion
GO:0007409 IMP axonogenesis
GO:0007411 IMP axon guidance
GO:0007420 IMP brain development
GO:0007512 IMP adult heart development
GO:0008152 IEA metabolic process
GO:0008283 IMP cell proliferation
GO:0008360 IMP regulation of cell shape
GO:0016459 IDA myosin complex
GO:0016460 IDA myosin II complex
GO:0021592 IMP fourth ventricle development
GO:0021670 IMP lateral ventricle development
GO:0021678 IMP third ventricle development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0030036 IGI actin cytoskeleton organization
GO:0030048 IEA actin filament-based movement
GO:0030239 IMP myofibril assembly
GO:0030424 IDA axon
GO:0030426 IDA growth cone
GO:0030496 IEA midbody
GO:0030898 IEA actin-dependent ATPase activity
GO:0031032 IEA actomyosin structure organization
GO:0031175 IMP neuron projection development
GO:0031594 IDA neuromuscular junction
GO:0032154 IEA cleavage furrow
GO:0042641 IEA actomyosin
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0043197 IDA dendritic spine
GO:0043531 IEA ADP binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0051015 IEA actin filament binding
GO:0055003 IMP cardiac myofibril assembly
GO:0055015 IMP ventricular cardiac muscle cell development
GO:0060041 IMP retina development in camera-type eye
GO:0070062 IEA extracellular vesicular exosome
GO:0097513 IEA myosin II filament

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000000103 myh10 myosin, heavy chain 10, non-muscle protein_coding Danio_rerio
ENSG00000133026 MYH10 myosin, heavy chain 10, non-muscle protein_coding Homo_sapiens

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