C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020905 Usp43 10090 - 11:67854523-67922153 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021288 Usp43-001 67854523-67922153 protein_coding
  ENSMUST00000108677 Usp43-004 67854523-67922153 protein_coding
  ENSMUST00000129961 Usp43-002 67855357-67876619 retained_intron
  ENSMUST00000152120 Usp43-003 67897239-67921209 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000021288ENSMUST00000108677ENSMUST00000129961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000021288 0.489±0.26 0.270±0.10 0.768±0.26 0.214±0.00 0.163±0.07 1.328±0.00 0.088±0.00 N/A 0.014±0.01 N/A 0.119±0.02 0.581±0.00 N/A
ENSMUST00000108677 0.232±0.08 N/A 0.549±0.00 0.152±0.00 0.153±0.02 1.580±0.00 N/A 0.281±0.00 0.010±0.01 0.621±0.00 0.075±0.00 N/A 0.670±0.14
ENSMUST00000129961 N/A N/A 0.916±0.00 0.729±0.00 0.256±0.00 N/A N/A N/A 0.037±0.03 N/A 0.180±0.06 N/A 0.526±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060632 usp43a ubiquitin specific peptidase 43a protein_coding Danio_rerio
ENSDARG00000088072 usp43b ubiquitin specific peptidase 43b protein_coding Danio_rerio
ENSG00000154914 USP43 ubiquitin specific peptidase 43 protein_coding Homo_sapiens

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