C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154914 USP43 9606 + 17:9644698-9729691 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285199 USP43-006 9645537-9729691 protein_coding
  ENST00000570475 USP43-002 9645537-9729037 protein_coding
  ENST00000570827 USP43-001 9644698-9729101 processed_transcript
  ENST00000573955 USP43-004 9701115-9729684 protein_coding
  ENST00000574408 USP43-003 9656436-9729684 protein_coding
  ENST00000575346 USP43-005 9669706-9686863 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285199ENST00000570475ENST00000570827ENST00000573955ENST00000574408ENST00000575346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285199 N/A N/A 0.105±0.00 N/A N/A 0.869±0.00 N/A 0.667±0.00 N/A N/A N/A 1.245±0.00 3.781±0.67 0.599±0.26
ENST00000570475 N/A N/A N/A 0.490±0.00 0.282±0.00 N/A N/A 0.819±0.00 N/A 0.438±0.00 N/A N/A 1.292±0.00 N/A
ENST00000570827 0.017±0.00 N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A N/A 0.155±0.00
ENST00000573955 N/A 0.081±0.00 0.238±0.00 N/A 0.334±0.00 0.233±0.00 N/A 0.323±0.28 0.362±0.30 0.591±0.34 0.062±0.00 0.265±0.00 7.820±6.49 1.050±0.00
ENST00000574408 N/A N/A 0.091±0.00 N/A 0.173±0.00 0.095±0.00 N/A N/A 0.171±0.00 N/A N/A 0.197±0.11 1.774±0.68 N/A
ENST00000575346 N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LE CIL_0001LE_0002 CGP 17:9576627-9729691

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008234 IEA cysteine-type peptidase activity
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060632 usp43a ubiquitin specific peptidase 43a protein_coding Danio_rerio
ENSDARG00000088072 usp43b ubiquitin specific peptidase 43b protein_coding Danio_rerio
ENSMUSG00000020905 Usp43 ubiquitin specific peptidase 43 protein_coding Mus_musculus

Loading