C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuroglobin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021032 Ngb 10090 - 12:87097531-87102539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021420 Ngb-001 87097531-87102539 protein_coding
  ENSMUST00000110176 Ngb-003 87098025-87102350 protein_coding
  ENSMUST00000110177 Ngb-002 87097531-87102522 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021420ENSMUST00000110176ENSMUST00000110177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021420 0.463±0.26 1.634±0.55 28.616±4.12 0.917±0.21 0.176±0.02 2.613±0.63 0.073±0.00 0.483±0.23 0.079±0.05 2.630±0.58 0.018±0.00 0.945±0.32 0.106±0.04 0.188±0.00
ENSMUST00000110176 0.824±0.00 0.580±0.21 N/A N/A 0.123±0.08 0.628±0.10 0.021±0.00 0.198±0.08 0.100±0.03 1.056±0.00 0.096±0.00 0.497±0.09 0.183±0.02 N/A
ENSMUST00000110177 0.186±0.01 0.733±0.38 3.286±0.00 N/A 0.174±0.02 N/A 0.058±0.03 0.125±0.06 0.060±0.03 N/A 0.057±0.02 0.630±0.00 0.016±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0006B7 CIL_0006B7_0002 CGP 12:87021340-87102539
CIL_0003OZ CIL_0003OZ_0002 CGP 12:87097531-87147902

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005344 IDA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006915 IEA apoptotic process
GO:0015671 IDA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053475 ngb neuroglobin protein_coding Danio_rerio
ENSG00000165553 NGB neuroglobin protein_coding Homo_sapiens

Loading