C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroglobin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110177 Ngb-002 ENSMUSG00000021032 10090 - 12:87097531-87102522 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000110177
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000110177 0.186±0.01 0.733±0.38 3.286±0.00 0.174±0.02 0.058±0.03 0.125±0.06 0.060±0.03 0.057±0.02 0.630±0.00 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_0006B7 CIL_0006B7_0002 CGP 12:87021340-87102539
CIL_0003OZ CIL_0003OZ_0002 CGP 12:87097531-87147902

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005344 IDA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0015671 IDA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

No Homologs available.

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