C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: goosecoid homeobox
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021095 Gsc 10090 - 12:104471209-104473330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021513 Gsc-001 104471209-104473330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021513
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021513 0.546±0.14 0.061±0.03 0.027±0.00 0.308±0.12 3.762±0.58 0.020±0.00 0.048±0.02 0.045±0.03 0.021±0.01 0.169±0.14 0.146±0.09 0.452±0.22 2.541±3.00 1.312±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QQ CIL_0003QQ_0002 CGP 12:104406729-104473330

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001085 IPI RNA polymerase II transcription factor binding
GO:0001103 IPI RNA polymerase II repressing transcription factor binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0009653 IGI anatomical structure morphogenesis
GO:0014036 ISS neural crest cell fate specification
GO:0021904 IGI dorsal/ventral neural tube patterning
GO:0023019 IDA signal transduction involved in regulation of gene expression
GO:0030178 IMP negative regulation of Wnt signaling pathway
GO:0030900 IGI forebrain development
GO:0042474 IMP middle ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0043583 IMP ear development
GO:0048644 IMP muscle organ morphogenesis
GO:0048704 IMP embryonic skeletal system morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059073 gsc goosecoid protein_coding Danio_rerio
ENSG00000133937 GSC goosecoid homeobox protein_coding Homo_sapiens

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