C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196136-ENSG00000133937 CGP 9606 14:94612384-94770230
GeneTranscriptPositionBiotype
ENSG00000133937 (GSC)
goosecoid homeobox 		ENST00000238558 (GSC-001) 94768216-94770230 protein_coding
ENSG00000196136 (SERPINA3)
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 		ENST00000393080 (SERPINA3-007) 94612384-94624055 protein_coding
ENST00000467132 (SERPINA3-002) 94612391-94624054 protein_coding
ENST00000482740 (SERPINA3-003) 94617642-94624052 protein_coding
ENST00000485588 (SERPINA3-004) 94612384-94613857 processed_transcript
ENST00000555820 (SERPINA3-006) 94612390-94619468 protein_coding
ENST00000556388 (SERPINA3-008) 94612391-94622763 processed_transcript
ENST00000556968 (SERPINA3-009) 94612405-94624054 nonsense_mediated_decay
ENST00000621603 (SERPINA3-010) 94619333-94619971 protein_coding
ENSG00000239269 (RPSAP4)
ribosomal protein SA pseudogene 4 		ENST00000488229 (RPSAP4-001) 94726288-94727175 processed_pseudogene
ENSG00000258805 (ADIPOR1P2)
adiponectin receptor 1 pseudogene 2 		ENST00000554199 (ADIPOR1P2-001) 94633705-94634524 processed_pseudogene
ENSG00000273259 (SERPINA3)
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 		ENST00000393078 (SERPINA3-201) 94612377-94624052 protein_coding
ENST00000553947 (SERPINA3-001) 94592058-94624646 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_0003QQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021091-ENSMUSG00000021095 CGP 10090 12:104406729-104473330
GeneTranscriptPositionBiotype
ENSMUSG00000021091 (Serpina3n)
serine (or cysteine) peptidase inhibitor, clade A, member 3N 		ENSMUST00000021506 (Serpina3n-001) 104406729-104414329 protein_coding
ENSMUSG00000021095 (Gsc)
goosecoid homeobox 		ENSMUST00000021513 (Gsc-001) 104471209-104473330 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QQ_0001ENSG00000133937ENST00000238558ENSG00000196136ENST00000393080ENST00000467132ENST00000482740ENST00000485588ENST00000555820ENST00000556388ENST00000556968ENST00000621603ENSG00000239269ENST00000488229ENSG00000258805ENST00000554199ENSG00000273259ENST00000393078ENST00000553947CIL_0003QQ_0002ENSMUSG00000021091ENSMUST00000021506ENSMUSG00000021095ENSMUST00000021513
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QQ_0001ENSG00000133937ENST00000238558ENSG00000196136ENST00000393080ENST00000555820ENST00000556968ENSG00000239269ENST00000488229ENSG00000258805ENST00000554199ENSG00000273259ENST00000393078CIL_0003QQ_0002ENSMUSG00000021091ENSMUST00000021506ENSMUSG00000021095ENSMUST00000021513
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133937 ENST00000238558 1.899±0.00 0.904±0.00 N/A 0.165±0.00 2.767±2.24 0.311±0.26 0.077±0.00 N/A 0.075±0.00 0.167±0.00 0.413±0.00 0.262±0.13 0.079±0.00 0.667±0.04
ENSG00000196136 ENST00000393080 6.146±0.00 26.403±0.00 N/A 84.368±0.00 8.356±0.00 30.122±0.00 15.112±0.00 393.863±0.00 4080.490±0.00 10.378±7.62 4.211±0.00 16.651±12.57 21.157±15.35 N/A
ENST00000467132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555820 N/A N/A N/A N/A 15.700±0.00 N/A 0.484±0.00 N/A N/A 1.868±0.00 0.646±0.00 N/A 2.156±0.00 N/A
ENST00000556388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556968 N/A N/A N/A N/A N/A 1.027±0.00 N/A N/A N/A N/A N/A 2.107±0.00 N/A N/A
ENST00000621603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239269 ENST00000488229 N/A 0.129±0.00 N/A 0.059±0.00 N/A 0.069±0.00 N/A 0.166±0.00 0.016±0.00 N/A 0.078±0.00 0.090±0.00 N/A 0.067±0.00
ENSG00000258805 ENST00000554199 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A
ENSG00000273259 ENST00000393078 7.928±0.00 35.984±0.00 N/A 42.411±41.24 17.165±4.97 19.539±18.93 10.310±9.30 500.425±41.11 2233.380±2230.01 28.253±25.50 1.076±0.00 45.959±44.11 24.585±22.19 N/A
ENST00000553947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021091 ENSMUST00000021506 277.424±244.63 10.803±2.03 40.379±11.02 6.955±9.60 87.293±18.84 12.015±2.84 3.205±2.02 1.509±0.20 127.447±102.51 64.820±13.92 0.844±0.49 27.081±12.50 4.144±5.45 3.163±1.97
ENSMUSG00000021095 ENSMUST00000021513 0.546±0.14 0.061±0.03 0.027±0.00 0.308±0.12 3.762±0.58 0.020±0.00 0.048±0.02 0.045±0.03 0.021±0.01 0.169±0.14 0.146±0.09 0.452±0.22 2.541±3.00 1.312±0.26

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