C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 20498
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021139 Gm20498 10090 - 12:81358860-81532905 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110339 Gm20498-003 81480937-81532877 processed_transcript
  ENSMUST00000164386 Gm20498-001 81358860-81532905 protein_coding
  ENSMUST00000166664 Gm20498-002 81470603-81532882 protein_coding
  ENSMUST00000168961 Gm20498-006 81474617-81532877 processed_transcript
  ENSMUST00000170958 Gm20498-005 81474595-81532761 processed_transcript
  ENSMUST00000171459 Gm20498-004 81474559-81532877 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaTestisENSMUST00000110339ENSMUST00000164386
Transcript ID Colon Ovary Placenta Testis
ENSMUST00000110339 12.697±0.00 13.218±0.00 N/A 23.392±0.00
ENSMUST00000164386 N/A 10.939±0.11 12.925±0.00 17.747±2.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002092 IDA positive regulation of receptor internalization
GO:0005515 IPI protein binding
GO:0006897 IEA endocytosis
GO:0009986 IDA cell surface
GO:0031966 IEA mitochondrial membrane
GO:0032926 IDA negative regulation of activin receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0070699 IPI type II activin receptor binding
GO:2000010 IDA positive regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077552 CABZ01081650.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000258644 SYNJ2BP-COX16 SYNJ2BP-COX16 readthrough protein_coding Homo_sapiens

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