C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 20498
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164386 Gm20498-001 ENSMUSG00000021139 10090 - 12:81358860-81532905 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000164386
Transcript ID Ovary Placenta Testis
ENSMUST00000164386 10.939±0.11 12.925±0.00 17.747±2.45

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002092 IDA positive regulation of receptor internalization
GO:0005515 IPI protein binding
GO:0006897 IEA endocytosis
GO:0009986 IDA cell surface
GO:0032926 IDA negative regulation of activin receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0070699 IPI type II activin receptor binding
GO:2000010 IDA positive regulation of protein localization to cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256366 SYNJ2BP-001 protein_coding Homo_sapiens 0 436
ENST00000389912 COX16-001 protein_coding Homo_sapiens 1e-33 148
ENST00000403681 HMGA2-001 protein_coding Homo_sapiens 0 353
ENST00000555276 SYNJ2BP-COX16-001 protein_coding Homo_sapiens 2e-34 148
ENST00000617124 SYNJ2BP-COX16-005 protein_coding Homo_sapiens 0 411
ENST00000617196 SYNJ2BP-COX16-003 protein_coding Homo_sapiens 0 414
ENST00000621525 SYNJ2BP-COX16-002 protein_coding Homo_sapiens 0 582

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