C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box-containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021200 Asb2 10090 - 12:103321142-103356001 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021617 Asb2-001 103321142-103356001 protein_coding
  ENSMUST00000127447 Asb2-003 103321146-103335584 retained_intron
  ENSMUST00000135694 Asb2-004 103334869-103336734 processed_transcript
  ENSMUST00000149431 Asb2-002 103321146-103338373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021617ENSMUST00000127447ENSMUST00000135694ENSMUST00000149431
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021617 9.969±9.87 N/A 25.873±0.79 0.240±0.25 11.076±9.03 18.696±0.80 99.818±21.57 1.039±0.46 0.933±0.16 6.511±2.57 251.827±75.08 22.668±12.28 1.707±2.12 1.093±0.57
ENSMUST00000127447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.316±0.00 N/A N/A
ENSMUST00000135694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00
ENSMUST00000149431 1.045±0.21 1.991±0.53 N/A 0.356±0.03 3.882±1.83 11.944±2.88 75.504±4.05 2.523±0.45 2.333±1.37 3.200±1.21 N/A 4.730±2.00 0.207±0.15 0.730±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QU CIL_0003QU_0002 CGP 12:103310975-103356001
CIL_0003QT CIL_0003QT_0002 CGP 12:103321142-103406350

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0031466 IDA Cul5-RING ubiquitin ligase complex
GO:0035556 IEA intracellular signal transduction
GO:0035914 IMP skeletal muscle cell differentiation
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0045445 IMP myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003797 asb2a.1 ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000078445 asb2b ankyrin repeat and SOCS box-containing 2b protein_coding Danio_rerio
ENSDARG00000096748 asb2a.1 ankyrin repeat and SOCS box-containing 2a, tandem duplicate 1 protein_coding Danio_rerio
ENSG00000100628 ASB2 ankyrin repeat and SOCS box containing 2 protein_coding Homo_sapiens

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