C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100628-ENSG00000089723 CGP 9606 14:93934153-94048930
GeneTranscriptPositionBiotype
ENSG00000089737 (DDX24)
DEAD (Asp-Glu-Ala-Asp) box helicase 24 		ENST00000330836 (DDX24-201) 94050938-94081183 protein_coding
ENST00000544005 (DDX24-003) 94050923-94081202 protein_coding
ENST00000553400 (DDX24-008) 94050922-94051824 processed_transcript
ENST00000553451 (DDX24-009) 94050922-94056163 processed_transcript
ENST00000555054 (DDX24-004) 94050965-94081202 protein_coding
ENST00000555324 (DDX24-010) 94078966-94081146 retained_intron
ENST00000555762 (DDX24-005) 94050920-94081198 retained_intron
ENST00000556635 (DDX24-011) 94051188-94053378 retained_intron
ENST00000621632 (DDX24-001) 94048291-94081245 protein_coding
ENST00000622786 (DDX24-202) 94050953-94062253 protein_coding
ENSG00000100628 (ASB2)
ankyrin repeat and SOCS box containing 2 		ENST00000315988 (ASB2-001) 93934166-93957421 protein_coding
ENST00000553883 (ASB2-004) 93934167-93940495 retained_intron
ENST00000555019 (ASB2-002) 93934153-93976791 protein_coding
ENST00000555287 (ASB2-007) 93953405-93976719 protein_coding
ENST00000555374 (ASB2-005) 93968255-93976739 processed_transcript
ENST00000555507 (ASB2-003) 93937719-93955579 protein_coding
ENST00000556062 (ASB2-010) 93951010-93955271 protein_coding
ENST00000556337 (ASB2-006) 93939335-93976730 processed_transcript
ENST00000556793 (ASB2-009) 93954191-93957049 retained_intron
ENST00000557613 (ASB2-008) 93954323-93974083 protein_coding
ENSG00000175699 (LINC00521)
long intergenic non-protein coding RNA 521 		ENST00000359253 (LINC00521-001) 93997296-94008863 lincRNA
ENST00000444118 (LINC00521-003) 93997270-94007552 lincRNA
ENST00000449472 (LINC00521-006) 93997340-93999460 lincRNA
ENST00000455802 (LINC00521-005) 93997274-94001223 lincRNA
ENSG00000258987 (RP11-131H24.4)
 ENST00000557646 (RP11-131H24.4-001) 93939555-93944129 antisense
ENSG00000265768 (MIR4506)
microRNA 4506 		ENST00000584693 (MIR4506-201) 93948226-93948302 miRNA
CIL_0003QT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021200-ENSMUSG00000021203 CGP 10090 12:103321142-103406350
GeneTranscriptPositionBiotype
ENSMUSG00000021200 (Asb2)
ankyrin repeat and SOCS box-containing 2 		ENSMUST00000021617 (Asb2-001) 103321142-103356001 protein_coding
ENSMUST00000127447 (Asb2-003) 103321146-103335584 retained_intron
ENSMUST00000135694 (Asb2-004) 103334869-103336734 processed_transcript
ENSMUST00000149431 (Asb2-002) 103321146-103338373 protein_coding
ENSMUSG00000021203 (Otub2)
OTU domain, ubiquitin aldehyde binding 2 		ENSMUST00000021620 (Otub2-001) 103388698-103406345 protein_coding
ENSMUST00000101094 (Otub2-004) 103388682-103406339 protein_coding
ENSMUST00000141055 (Otub2-003) 103388766-103406345 retained_intron
ENSMUST00000148371 (Otub2-002) 103388985-103402901 protein_coding
ENSMUST00000179684 (Otub2-201) 103392654-103406350 protein_coding
ENSMUSG00000090185 (Gm15523)
predicted gene 15523 		ENSMUST00000160463 (Gm15523-001) 103336906-103348057 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QT_0001ENSG00000089737ENST00000330836ENST00000544005ENST00000553400ENST00000553451ENST00000555054ENST00000555324ENST00000555762ENST00000556635ENST00000621632ENST00000622786ENSG00000100628ENST00000315988ENST00000553883ENST00000555019ENST00000555287ENST00000555374ENST00000555507ENST00000556062ENST00000556337ENST00000556793ENST00000557613ENSG00000175699ENST00000359253ENST00000444118ENST00000449472ENST00000455802ENSG00000258987ENST00000557646ENSG00000265768ENST00000584693CIL_0003QT_0002ENSMUSG00000021200ENSMUST00000021617ENSMUST00000127447ENSMUST00000135694ENSMUST00000149431ENSMUSG00000021203ENSMUST00000021620ENSMUST00000101094ENSMUST00000141055ENSMUST00000148371ENSMUST00000179684ENSMUSG00000090185ENSMUST00000160463
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QT_0001ENSG00000089737ENST00000330836ENST00000544005ENST00000555054ENST00000555324ENST00000555762ENST00000556635ENST00000621632ENST00000622786ENSG00000100628ENST00000315988ENST00000553883ENST00000555019ENST00000555287ENST00000555507ENST00000556062ENST00000556793ENSG00000175699ENST00000359253ENST00000444118ENSG00000258987ENST00000557646ENSG00000265768ENST00000584693CIL_0003QT_0002ENSMUSG00000021200ENSMUST00000021617ENSMUST00000127447ENSMUST00000135694ENSMUST00000149431ENSMUSG00000021203ENSMUST00000021620ENSMUST00000101094ENSMUST00000141055ENSMUST00000148371ENSMUST00000179684ENSMUSG00000090185ENSMUST00000160463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089737 ENST00000330836 14.174±0.00 N/A 5.970±0.00 19.729±8.35 12.019±0.00 4.711±0.00 10.069±4.04 8.740±6.10 3.648±0.46 15.463±2.27 7.799±4.45 6.685±1.78 12.139±1.18 26.413±9.04
ENST00000544005 N/A N/A N/A 20.589±0.00 N/A 10.161±6.23 10.736±0.00 N/A 4.707±0.00 21.871±0.00 4.561±1.56 9.578±0.00 9.216±2.42 39.436±0.00
ENST00000553400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555054 28.605±0.00 28.892±0.00 N/A 21.590±9.91 27.697±0.00 21.247±0.00 13.619±11.88 16.129±13.80 6.504±1.13 30.463±0.00 11.052±9.91 12.846±10.02 15.165±5.41 28.304±8.47
ENST00000555324 N/A N/A N/A 35.062±0.00 N/A 20.572±0.00 5.500±0.00 3.946±0.00 N/A N/A N/A 33.047±0.00 N/A 43.997±0.00
ENST00000555762 N/A 9.755±0.00 1.930±0.00 5.883±0.00 4.480±0.71 2.290±0.00 N/A 0.510±0.00 1.559±0.00 2.859±0.00 N/A 3.402±1.28 N/A 8.307±0.00
ENST00000556635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.082±0.00 27.060±0.00 65.964±0.00
ENST00000621632 N/A N/A N/A N/A N/A N/A N/A 0.730±0.00 N/A N/A 0.847±0.00 N/A N/A N/A
ENST00000622786 N/A 22.587±0.00 N/A 33.294±0.00 N/A N/A N/A N/A 9.483±0.00 N/A N/A 23.271±3.97 12.927±0.00 N/A
ENSG00000100628 ENST00000315988 N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A 0.107±0.00 N/A
ENST00000553883 N/A N/A N/A N/A N/A 0.592±0.00 N/A N/A 1.838±0.00 N/A 11.949±0.00 N/A N/A 1.769±0.00
ENST00000555019 0.211±0.00 3.685±0.00 N/A 0.773±0.00 3.908±2.87 13.007±12.26 28.564±24.50 0.229±0.00 3.618±0.00 1.488±1.32 117.547±83.80 4.024±1.37 N/A 7.342±0.00
ENST00000555287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.162±0.00 N/A N/A
ENST00000555374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555507 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556062 N/A N/A N/A N/A 1.604±0.00 N/A N/A N/A N/A N/A N/A N/A 0.502±0.00 N/A
ENST00000556337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556793 N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175699 ENST00000359253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.528±0.00 N/A N/A 7.653±3.98
ENST00000444118 0.008±0.00 0.009±0.00 N/A N/A 0.009±0.00 0.008±0.00 N/A 0.009±0.00 N/A 0.008±0.00 N/A N/A N/A N/A
ENST00000449472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258987 ENST00000557646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.145±0.00
ENSG00000265768 ENST00000584693 N/A N/A N/A N/A N/A 2.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021200 ENSMUST00000021617 9.969±9.87 N/A 25.873±0.79 0.240±0.25 11.076±9.03 18.696±0.80 99.818±21.57 1.039±0.46 0.933±0.16 6.511±2.57 251.827±75.08 22.668±12.28 1.707±2.12 1.093±0.57
ENSMUST00000127447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.316±0.00 N/A N/A
ENSMUST00000135694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00
ENSMUST00000149431 1.045±0.21 1.991±0.53 N/A 0.356±0.03 3.882±1.83 11.944±2.88 75.504±4.05 2.523±0.45 2.333±1.37 3.200±1.21 N/A 4.730±2.00 0.207±0.15 0.730±0.00
ENSMUSG00000021203 ENSMUST00000021620 2.397±1.17 2.646±0.40 3.913±0.81 4.058±1.62 2.336±0.72 0.932±0.26 1.424±0.25 1.773±0.29 5.183±4.49 2.712±0.58 3.110±0.82 3.257±1.81 0.586±0.21 92.680±49.10
ENSMUST00000101094 N/A 0.266±0.00 N/A N/A N/A 0.173±0.03 N/A N/A 0.234±0.07 N/A N/A 1.067±0.00 N/A N/A
ENSMUST00000141055 N/A N/A 1.090±0.15 1.676±0.51 0.626±0.21 0.607±0.00 0.324±0.02 0.352±0.02 2.058±1.50 1.242±0.15 1.608±0.11 1.109±0.60 0.473±0.16 N/A
ENSMUST00000148371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.299±0.00 0.795±0.00 109.255±0.00
ENSMUST00000179684 N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A 0.392±0.00 N/A
ENSMUSG00000090185 ENSMUST00000160463 0.128±0.02 0.409±0.16 0.109±0.00 N/A 0.426±0.05 0.326±0.10 0.210±0.12 0.362±0.19 0.246±0.16 0.200±0.07 0.155±0.07 0.398±0.15 N/A N/A

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