C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial transcription termination factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021519 Mterfd1 10090 - 13:66906968-66933088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021991 Mterfd1-001 66912118-66933088 protein_coding
  ENSMUST00000172597 Mterfd1-005 66922805-66932904 protein_coding
  ENSMUST00000172807 Mterfd1-006 66930620-66933000 processed_transcript
  ENSMUST00000173062 Mterfd1-007 66931189-66933041 processed_transcript
  ENSMUST00000173158 Mterfd1-002 66912126-66933067 nonsense_mediated_decay
  ENSMUST00000173407 Mterfd1-008 66917044-66932708 nonsense_mediated_decay
  ENSMUST00000173773 Mterfd1-004 66929995-66933038 protein_coding
  ENSMUST00000173891 Mterfd1-012 66906968-66916631 protein_coding
  ENSMUST00000173910 Mterfd1-009 66917074-66930224 nonsense_mediated_decay
  ENSMUST00000174011 Mterfd1-003 66921189-66933038 retained_intron
  ENSMUST00000174134 Mterfd1-011 66912237-66919661 processed_transcript
  ENSMUST00000174339 Mterfd1-010 66928273-66930286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverENSMUST00000021991
Transcript ID Bladder Brain Liver
ENSMUST00000021991 19.382±0.00 20.288±2.24 10.743±2.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SY CIL_0006SY_0002 CGP 13:66906968-66998401

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045892 IMP negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003207 mterfd1 MTERF domain containing 1 protein_coding Danio_rerio
ENSG00000156469 MTERF3 mitochondrial transcription termination factor 3 protein_coding Homo_sapiens

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