C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006SY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156469-ENSG00000156471 CGP 9606 8:96239398-96336995
GeneTranscriptPositionBiotype
ENSG00000156469 (MTERF3)
mitochondrial transcription termination factor 3 		ENST00000287025 (MTERF3-002) 96239435-96261589 protein_coding
ENST00000517720 (MTERF3-004) 96258488-96261588 protein_coding
ENST00000522822 (MTERF3-003) 96239424-96257275 protein_coding
ENST00000523821 (MTERF3-001) 96239398-96261610 protein_coding
ENST00000524341 (MTERF3-005) 96239429-96257070 protein_coding
ENSG00000156471 (PTDSS1)
phosphatidylserine synthase 1 		ENST00000337004 (PTDSS1-002) 96261913-96334552 nonsense_mediated_decay
ENST00000517309 (PTDSS1-001) 96261715-96336995 protein_coding
ENST00000517557 (PTDSS1-005) 96261967-96287388 retained_intron
ENST00000517982 (PTDSS1-006) 96330317-96333892 retained_intron
ENST00000518776 (PTDSS1-004) 96283597-96304157 processed_transcript
ENST00000522072 (PTDSS1-003) 96295192-96333982 protein_coding
CIL_0006SY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021519-ENSMUSG00000021518 CGP 10090 13:66906968-66998401
GeneTranscriptPositionBiotype
ENSMUSG00000021518 (Ptdss1)
phosphatidylserine synthase 1 		ENSMUST00000021990 (Ptdss1-201) 66932830-66998401 protein_coding
ENSMUSG00000021519 (Mterfd1)
mitochondrial transcription termination factor 3 		ENSMUST00000021991 (Mterfd1-001) 66912118-66933088 protein_coding
ENSMUST00000172597 (Mterfd1-005) 66922805-66932904 protein_coding
ENSMUST00000172807 (Mterfd1-006) 66930620-66933000 processed_transcript
ENSMUST00000173062 (Mterfd1-007) 66931189-66933041 processed_transcript
ENSMUST00000173158 (Mterfd1-002) 66912126-66933067 nonsense_mediated_decay
ENSMUST00000173407 (Mterfd1-008) 66917044-66932708 nonsense_mediated_decay
ENSMUST00000173773 (Mterfd1-004) 66929995-66933038 protein_coding
ENSMUST00000173891 (Mterfd1-012) 66906968-66916631 protein_coding
ENSMUST00000173910 (Mterfd1-009) 66917074-66930224 nonsense_mediated_decay
ENSMUST00000174011 (Mterfd1-003) 66921189-66933038 retained_intron
ENSMUST00000174134 (Mterfd1-011) 66912237-66919661 processed_transcript
ENSMUST00000174339 (Mterfd1-010) 66928273-66930286 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SY_0001ENSG00000156469ENST00000287025ENST00000517720ENST00000522822ENST00000523821ENST00000524341ENSG00000156471ENST00000337004ENST00000517309ENST00000517557ENST00000517982ENST00000518776ENST00000522072CIL_0006SY_0002ENSMUSG00000021518ENSMUST00000021990ENSMUSG00000021519ENSMUST00000021991ENSMUST00000172597ENSMUST00000172807ENSMUST00000173062ENSMUST00000173158ENSMUST00000173407ENSMUST00000173773ENSMUST00000173891ENSMUST00000173910ENSMUST00000174011ENSMUST00000174134ENSMUST00000174339
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006SY_0001ENSG00000156469ENST00000287025ENST00000522822ENST00000524341ENSG00000156471ENST00000337004ENST00000517309ENST00000518776ENST00000522072CIL_0006SY_0002ENSMUSG00000021518ENSMUST00000021990ENSMUSG00000021519ENSMUST00000021991
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156469 ENST00000287025 1.476±0.00 2.012±0.00 0.760±0.00 1.824±0.01 2.641±1.92 1.188±1.06 4.798±2.91 2.015±1.67 3.160±0.70 1.404±0.09 2.629±1.84 5.439±2.00 3.667±0.58 6.320±0.91
ENST00000517720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522822 0.907±0.00 1.456±0.00 N/A N/A N/A 0.412±0.00 N/A N/A N/A 1.177±0.00 1.545±0.00 1.269±0.00 0.995±0.00 N/A
ENST00000523821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524341 N/A N/A N/A N/A N/A N/A N/A 0.529±0.00 N/A 1.030±0.00 1.850±0.00 2.516±0.00 N/A N/A
ENSG00000156471 ENST00000337004 16.252±0.00 16.722±0.00 1.891±0.00 14.582±1.88 9.615±1.25 8.281±1.72 29.359±15.20 10.316±0.23 9.325±2.47 13.947±0.00 6.154±3.96 20.116±9.62 29.462±11.48 12.760±0.82
ENST00000517309 N/A N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518776 N/A N/A 7.831±0.00 22.821±0.00 11.864±0.00 7.542±0.00 15.751±0.00 19.058±0.00 7.519±0.00 N/A 1.771±0.00 20.742±0.00 N/A N/A
ENST00000522072 12.382±0.00 N/A 1.679±0.00 13.787±0.00 5.790±0.00 3.627±0.00 N/A N/A N/A N/A 4.373±0.00 17.089±8.61 34.949±0.00 9.638±0.72
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021518 ENSMUST00000021990 20.293±3.11 13.727±2.83 13.086±6.35 15.307±5.71 19.399±3.69 22.217±2.84 16.031±0.69 19.881±1.25 10.517±4.83 20.441±0.79 N/A 20.542±2.98 16.249±5.78 20.180±7.48
ENSMUSG00000021519 ENSMUST00000021991 N/A N/A 19.382±0.00 20.288±2.24 N/A N/A N/A N/A 10.743±2.13 N/A N/A N/A N/A N/A
ENSMUST00000172597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading