C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin domain containing 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021830 Txndc16 10090 - 14:45134448-45220328 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022377 Txndc16-003 45134448-45219394 protein_coding
  ENSMUST00000123118 Txndc16-008 45217888-45219390 processed_transcript
  ENSMUST00000123879 Txndc16-002 45134907-45220328 protein_coding
  ENSMUST00000128484 Txndc16-006 45168224-45219382 retained_intron
  ENSMUST00000139526 Txndc16-001 45134899-45219425 protein_coding
  ENSMUST00000143609 Txndc16-007 45206748-45219397 protein_coding
  ENSMUST00000147853 Txndc16-005 45167355-45219390 retained_intron
  ENSMUST00000150648 Txndc16-009 45213294-45219364 processed_transcript
  ENSMUST00000153383 Txndc16-004 45208027-45219402 retained_intron
  ENSMUST00000156600 Txndc16-010 45164821-45169325 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022377ENSMUST00000123118ENSMUST00000139526ENSMUST00000153383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022377 0.874±0.00 1.268±0.00 2.129±0.37 1.917±0.00 N/A 0.644±0.00 0.554±0.09 1.106±0.00 0.329±0.13 N/A 1.036±0.18 2.153±0.31 0.520±0.25 1.518±0.26
ENSMUST00000123118 N/A 7.855±0.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139526 3.970±0.30 2.341±0.42 8.551±0.76 7.316±1.11 4.174±0.81 2.362±0.48 2.177±0.26 2.851±0.21 0.783±0.32 4.514±0.46 4.923±0.60 4.038±2.64 2.589±1.67 3.626±0.99
ENSMUST00000153383 1.456±0.70 N/A N/A 3.681±1.40 1.503±0.00 1.597±0.57 0.477±0.08 1.041±0.25 0.361±0.21 2.355±0.44 N/A 2.044±0.55 0.180±0.00 0.387±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069O CIL_00069O_0003 CGP 14:44988195-45220328
CIL_00069R CIL_00069R_0003 CGP 14:45134448-45281230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005788 IEA endoplasmic reticulum lumen
GO:0008150 ND biological_process
GO:0045454 IEA cell redox homeostasis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032256 txndc16 thioredoxin domain containing 16 protein_coding Danio_rerio
ENSG00000087301 TXNDC16 thioredoxin domain containing 16 protein_coding Homo_sapiens

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