C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00069R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032256-ENSDARG00000045289 CGP 7955 17:14759340-14853366
GeneTranscriptPositionBiotype
ENSDARG00000032256 (txndc16)
thioredoxin domain containing 16 		ENSDART00000105064 (txndc16-001) 14759340-14807623 protein_coding
ENSDART00000154002 (txndc16-002) 14760449-14777661 nonsense_mediated_decay
ENSDARG00000045289 (gpr137c)
G protein-coupled receptor 137c 		ENSDART00000066604 (gpr137c-001) 14806809-14853366 protein_coding
CIL_00069R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000087301-ENSG00000180998 CGP 9606 14:52430590-52637713
GeneTranscriptPositionBiotype
ENSG00000087301 (TXNDC16)
thioredoxin domain containing 16 		ENST00000281741 (TXNDC16-001) 52430590-52552506 protein_coding
ENST00000554399 (TXNDC16-002) 52439259-52552522 processed_transcript
ENST00000555312 (TXNDC16-004) 52455441-52470674 nonsense_mediated_decay
ENST00000557374 (TXNDC16-003) 52488363-52552505 protein_coding
ENSG00000180998 (GPR137C)
G protein-coupled receptor 137C 		ENST00000321662 (GPR137C-001) 52553148-52637713 protein_coding
ENST00000542169 (GPR137C-002) 52553288-52636725 protein_coding
ENST00000555369 (GPR137C-003) 52611480-52637713 retained_intron
ENST00000555622 (GPR137C-004) 52553419-52632260 protein_coding
CIL_00069R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021830-ENSMUSG00000049092 CGP 10090 14:45134448-45281230
GeneTranscriptPositionBiotype
ENSMUSG00000021830 (Txndc16)
thioredoxin domain containing 16 		ENSMUST00000022377 (Txndc16-003) 45134448-45219394 protein_coding
ENSMUST00000123118 (Txndc16-008) 45217888-45219390 processed_transcript
ENSMUST00000123879 (Txndc16-002) 45134907-45220328 protein_coding
ENSMUST00000128484 (Txndc16-006) 45168224-45219382 retained_intron
ENSMUST00000139526 (Txndc16-001) 45134899-45219425 protein_coding
ENSMUST00000143609 (Txndc16-007) 45206748-45219397 protein_coding
ENSMUST00000147853 (Txndc16-005) 45167355-45219390 retained_intron
ENSMUST00000150648 (Txndc16-009) 45213294-45219364 processed_transcript
ENSMUST00000153383 (Txndc16-004) 45208027-45219402 retained_intron
ENSMUST00000156600 (Txndc16-010) 45164821-45169325 retained_intron
ENSMUSG00000049092 (Gpr137c)
G protein-coupled receptor 137C 		ENSMUST00000146150 (Gpr137c-001) 45219993-45281230 protein_coding
ENSMUST00000147957 (Gpr137c-003) 45219719-45223922 processed_transcript
ENSMUST00000151749 (Gpr137c-002) 45265326-45279253 retained_intron
ENSMUSG00000082463 (Gm15765)
predicted gene 15765 		ENSMUST00000118407 (Gm15765-001) 45211523-45212432 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069R_0001ENSDARG00000032256ENSDART00000105064ENSDART00000154002ENSDARG00000045289ENSDART00000066604CIL_00069R_0002ENSG00000087301ENST00000281741ENST00000554399ENST00000555312ENST00000557374ENSG00000180998ENST00000321662ENST00000542169ENST00000555369ENST00000555622CIL_00069R_0003ENSMUSG00000021830ENSMUST00000022377ENSMUST00000123118ENSMUST00000123879ENSMUST00000128484ENSMUST00000139526ENSMUST00000143609ENSMUST00000147853ENSMUST00000150648ENSMUST00000153383ENSMUST00000156600ENSMUSG00000049092ENSMUST00000146150ENSMUST00000147957ENSMUST00000151749ENSMUSG00000082463ENSMUST00000118407
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00069R_0001ENSDARG00000032256ENSDART00000105064ENSDARG00000045289ENSDART00000066604CIL_00069R_0002ENSG00000087301ENST00000281741ENSG00000180998ENST00000321662ENST00000542169ENST00000555369ENST00000555622CIL_00069R_0003ENSMUSG00000021830ENSMUST00000022377ENSMUST00000123118ENSMUST00000139526ENSMUST00000153383ENSMUSG00000049092ENSMUST00000146150ENSMUST00000147957ENSMUSG00000082463ENSMUST00000118407
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032256 ENSDART00000105064 N/A N/A N/A 2.175±0.60 N/A N/A 0.865±0.39 1.135±0.20 0.072±0.00 N/A 0.266±0.00 N/A N/A N/A
ENSDART00000154002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000045289 ENSDART00000066604 N/A N/A N/A N/A N/A N/A 7.436±6.52 N/A 0.730±0.00 N/A 1.354±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087301 ENST00000281741 0.878±0.00 0.456±0.00 N/A 2.522±0.67 1.309±0.33 1.755±0.15 0.570±0.00 0.386±0.00 0.282±0.19 1.265±0.32 0.428±0.01 1.488±0.49 0.733±0.38 2.203±0.09
ENST00000554399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180998 ENST00000321662 0.137±0.00 N/A N/A 3.982±0.35 0.153±0.00 0.139±0.00 0.051±0.01 0.186±0.11 0.154±0.11 0.179±0.14 0.037±0.00 0.170±0.12 0.035±0.00 0.538±0.14
ENST00000542169 N/A 0.114±0.00 N/A N/A 0.401±0.00 0.059±0.00 0.061±0.00 N/A N/A 0.385±0.00 0.276±0.00 0.097±0.00 0.118±0.02 0.940±0.00
ENST00000555369 0.027±0.00 0.078±0.00 N/A 0.339±0.00 0.087±0.02 0.025±0.00 0.061±0.03 0.121±0.00 0.094±0.00 0.086±0.00 0.007±0.00 0.058±0.00 N/A 0.107±0.00
ENST00000555622 N/A N/A 1.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021830 ENSMUST00000022377 0.874±0.00 1.268±0.00 2.129±0.37 1.917±0.00 N/A 0.644±0.00 0.554±0.09 1.106±0.00 0.329±0.13 N/A 1.036±0.18 2.153±0.31 0.520±0.25 1.518±0.26
ENSMUST00000123118 N/A 7.855±0.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139526 3.970±0.30 2.341±0.42 8.551±0.76 7.316±1.11 4.174±0.81 2.362±0.48 2.177±0.26 2.851±0.21 0.783±0.32 4.514±0.46 4.923±0.60 4.038±2.64 2.589±1.67 3.626±0.99
ENSMUST00000143609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153383 1.456±0.70 N/A N/A 3.681±1.40 1.503±0.00 1.597±0.57 0.477±0.08 1.041±0.25 0.361±0.21 2.355±0.44 N/A 2.044±0.55 0.180±0.00 0.387±0.00
ENSMUST00000156600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049092 ENSMUST00000146150 N/A 0.736±0.09 N/A 8.719±2.22 N/A N/A 1.200±0.26 N/A N/A N/A N/A 0.928±0.00 N/A N/A
ENSMUST00000147957 N/A 0.689±0.00 N/A N/A 1.889±0.00 0.827±0.24 N/A 0.785±0.00 0.413±0.21 N/A N/A 2.791±1.18 N/A 2.795±0.00
ENSMUST00000151749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082463 ENSMUST00000118407 0.050±0.02 0.053±0.00 0.030±0.00 0.150±0.07 0.099±0.02 0.079±0.03 0.029±0.00 0.065±0.02 0.027±0.01 0.076±0.02 N/A 0.115±0.02 0.031±0.00 0.071±0.02

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