C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: surfactant associated protein C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022097 Sftpc 10090 - 14:70520941-70524081 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022692 Sftpc-201 70520941-70524081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022692
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022692 0.903±0.62 1.150±0.22 0.035±0.00 0.062±0.01 1.878±0.48 0.312±0.26 7.122±7.03 0.053±0.02 0.175±0.17 11780.650±612.81 0.741±0.63 2.390±1.42 0.034±0.03 0.181±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000812 CIL_000812_0002 VISTA 14:70334498-70935318
CIL_0008ZI CIL_0008ZI_0002 VISTA 14:70339990-70941193
CIL_000810 CIL_000810_0002 VISTA 14:70383794-70984839

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0005615 IEA extracellular space
GO:0005737 IDA cytoplasm
GO:0005771 IEA multivesicular body
GO:0007585 IEA respiratory gaseous exchange
GO:0007623 IEA circadian rhythm
GO:0009725 IEA response to hormone
GO:0009749 IEA response to glucose
GO:0010033 IEA response to organic substance
GO:0032496 IEA response to lipopolysaccharide
GO:0032526 IEA response to retinoic acid
GO:0033189 IEA response to vitamin A
GO:0042803 IEA protein homodimerization activity
GO:0051260 IEA protein homooligomerization
GO:0051384 IEA response to glucocorticoid
GO:0051591 IEA response to cAMP
GO:0055093 IEA response to hyperoxia
GO:0070741 IEA response to interleukin-6
GO:0070848 IEA response to growth factor
GO:0071260 IEA cellular response to mechanical stimulus
GO:0071732 IEA cellular response to nitric oxide
GO:0097208 IEA alveolar lamellar body

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168484 SFTPC surfactant protein C protein_coding Homo_sapiens

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