C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022197 Pdzd2 10090 - 15:12359711-12739924 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075317 Pdzd2-004 12359711-12592556 protein_coding
  ENSMUST00000185619 Pdzd2-012 12522564-12549785 processed_transcript
  ENSMUST00000185855 Pdzd2-009 12549063-12550232 retained_intron
  ENSMUST00000186113 Pdzd2-013 12458106-12493559 protein_coding
  ENSMUST00000187398 Pdzd2-011 12544944-12549281 retained_intron
  ENSMUST00000188549 Pdzd2-008 12398478-12401308 retained_intron
  ENSMUST00000189324 Pdzd2-010 12458146-12549877 protein_coding
  ENSMUST00000189469 Pdzd2-007 12443331-12739924 retained_intron
  ENSMUST00000189746 Pdzd2-005 12588515-12599056 processed_transcript
  ENSMUST00000190929 Pdzd2-002 12407282-12549278 protein_coding
  ENSMUST00000191339 Pdzd2-006 12404932-12412380 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075317ENSMUST00000189746
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075317 1.641±0.37 0.545±0.00 6.567±3.49 0.700±0.32 1.504±0.62 0.658±0.45 2.317±1.09 1.349±0.64 0.061±0.03 18.284±0.00 1.210±0.35 0.732±0.30 1.148±0.82 1.723±0.41
ENSMUST00000189746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.631±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059801 pdzd2 PDZ domain containing 2 protein_coding Danio_rerio
ENSG00000133401 PDZD2 PDZ domain containing 2 protein_coding Homo_sapiens

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