C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DDB1 and CUL4 associated factor 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022214 Dcaf11 10090 + 14:55560006-55570065 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072530 Dcaf11-004 55560929-55570062 protein_coding
  ENSMUST00000117236 Dcaf11-001 55560006-55570065 protein_coding
  ENSMUST00000117701 Dcaf11-006 55561067-55569931 protein_coding
  ENSMUST00000121622 Dcaf11-003 55560512-55569931 protein_coding
  ENSMUST00000127991 Dcaf11-012 55560482-55561099 processed_transcript
  ENSMUST00000128490 Dcaf11-015 55560971-55563780 protein_coding
  ENSMUST00000129310 Dcaf11-018 55560121-55569535 retained_intron
  ENSMUST00000133256 Dcaf11-011 55560025-55562933 protein_coding
  ENSMUST00000143375 Dcaf11-007 55561067-55569931 nonsense_mediated_decay
  ENSMUST00000143431 Dcaf11-013 55560518-55561443 protein_coding
  ENSMUST00000145983 Dcaf11-017 55565862-55569389 processed_transcript
  ENSMUST00000147981 Dcaf11-009 55560018-55561441 protein_coding
  ENSMUST00000150019 Dcaf11-002 55560062-55570064 nonsense_mediated_decay
  ENSMUST00000150481 Dcaf11-014 55560533-55564403 protein_coding
  ENSMUST00000151245 Dcaf11-010 55560021-55560756 processed_transcript
  ENSMUST00000152681 Dcaf11-008 55560534-55570061 nonsense_mediated_decay
  ENSMUST00000153638 Dcaf11-005 55560984-55570064 retained_intron
  ENSMUST00000155029 Dcaf11-016 55564391-55564843 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072530ENSMUST00000117236ENSMUST00000121622ENSMUST00000128490ENSMUST00000129310ENSMUST00000143375ENSMUST00000143431ENSMUST00000150019ENSMUST00000152681
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072530 4.336±0.57 N/A 13.167±2.53 6.844±0.00 7.045±1.55 8.044±0.00 N/A N/A 30.513±18.56 N/A N/A 9.301±5.12 7.066±4.39 3.089±0.00
ENSMUST00000117236 9.574±3.49 13.300±2.32 17.758±1.29 9.259±2.91 11.143±3.52 18.999±4.09 16.403±2.82 28.364±3.64 24.467±7.76 10.238±1.74 44.236±4.05 9.882±4.25 4.969±2.38 N/A
ENSMUST00000121622 12.290±2.00 22.397±3.38 N/A 4.880±0.00 17.187±8.86 11.341±2.14 20.920±1.56 25.349±5.09 26.910±11.24 17.625±2.42 N/A 16.458±2.27 3.013±1.17 7.840±0.53
ENSMUST00000128490 N/A N/A N/A 28.334±0.00 N/A N/A N/A N/A N/A N/A N/A 41.357±0.00 12.628±3.31 8.218±0.00
ENSMUST00000129310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.379±0.00
ENSMUST00000143375 N/A 11.765±1.46 N/A N/A 5.354±0.00 N/A N/A N/A N/A N/A N/A 9.624±0.07 4.157±0.00 N/A
ENSMUST00000143431 N/A N/A N/A 100.751±0.00 N/A N/A N/A N/A N/A N/A N/A 221.728±0.00 51.738±15.14 52.367±0.00
ENSMUST00000150019 N/A N/A N/A N/A N/A N/A N/A 12.506±0.00 23.651±2.96 8.376±0.00 19.169±0.96 8.366±3.22 N/A N/A
ENSMUST00000152681 6.067±0.21 N/A 6.687±0.74 9.572±2.16 4.086±0.00 N/A 11.010±0.88 10.474±0.00 N/A 7.115±0.69 N/A 6.577±1.29 3.343±2.02 5.367±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F5 CIL_0003F5_0002 CGP 14:55560006-55576952

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009868 dcaf11 ddb1 and cul4 associated factor 11 protein_coding Danio_rerio
ENSG00000100897 DCAF11 DDB1 and CUL4 associated factor 11 protein_coding Homo_sapiens
ENSG00000259371 RP11-468E2.6 protein_coding Homo_sapiens

Loading