C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117236 Dcaf11-001 ENSMUSG00000022214 10090 + 14:55560006-55570065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000117236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000117236 9.574±3.49 13.300±2.32 17.758±1.29 9.259±2.91 11.143±3.52 18.999±4.09 16.403±2.82 28.364±3.64 24.467±7.76 10.238±1.74 44.236±4.05 9.882±4.25 4.969±2.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F5 CIL_0003F5_0002 CGP 14:55560006-55576952

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0080008 ISS Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326009 DCAF11-008 nonsense_mediated_decay Homo_sapiens 0 2124
ENST00000396936 DCAF11-002 protein_coding Homo_sapiens 0 1581
ENST00000396941 DCAF11-003 protein_coding Homo_sapiens 0 1903
ENST00000446197 DCAF11-001 protein_coding Homo_sapiens 0 2274
ENST00000557802 DCAF11-004 nonsense_mediated_decay Homo_sapiens 0 1581
ENST00000557809 DCAF11-029 processed_transcript Homo_sapiens 0 422
ENST00000557810 DCAF11-031 protein_coding Homo_sapiens 0 536
ENST00000557888 DCAF11-037 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000557952 DCAF11-017 processed_transcript Homo_sapiens 0 322
ENST00000558215 DCAF11-027 protein_coding Homo_sapiens 0 392
ENST00000558325 RP11-468E2.6-001 protein_coding Homo_sapiens 0 353
ENST00000558408 DCAF11-036 protein_coding Homo_sapiens 0 470
ENST00000558624 DCAF11-006 retained_intron Homo_sapiens 0 859
ENST00000558638 DCAF11-034 protein_coding Homo_sapiens 0 399
ENST00000558706 DCAF11-016 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000558914 DCAF11-007 nonsense_mediated_decay Homo_sapiens 0 1873
ENST00000559017 DCAF11-028 protein_coding Homo_sapiens 0 492
ENST00000559115 DCAF11-005 protein_coding Homo_sapiens 0 2237
ENST00000559144 DCAF11-010 protein_coding Homo_sapiens 0 970
ENST00000559288 DCAF11-020 protein_coding Homo_sapiens 0 316
ENST00000559354 DCAF11-021 protein_coding Homo_sapiens 0 276
ENST00000559382 DCAF11-025 protein_coding Homo_sapiens 0 316
ENST00000559451 DCAF11-015 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000559472 DCAF11-011 retained_intron Homo_sapiens 0 211
ENST00000559593 DCAF11-030 protein_coding Homo_sapiens 0 616
ENST00000559796 DCAF11-035 protein_coding Homo_sapiens 0 237
ENST00000560046 DCAF11-012 retained_intron Homo_sapiens 0 636
ENST00000560171 DCAF11-013 processed_transcript Homo_sapiens 0 318
ENST00000560457 DCAF11-032 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000560459 DCAF11-023 protein_coding Homo_sapiens 0 316
ENST00000560614 DCAF11-014 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000560713 DCAF11-024 protein_coding Homo_sapiens 0 276
ENST00000560901 DCAF11-018 protein_coding Homo_sapiens 0 279
ENST00000561001 DCAF11-019 protein_coding Homo_sapiens 0 302
ENST00000561016 DCAF11-039 processed_transcript Homo_sapiens 0 279
ENST00000561041 DCAF11-038 protein_coding Homo_sapiens 0 636
ENST00000561056 DCAF11-026 processed_transcript Homo_sapiens 0 244
ENST00000561375 DCAF11-022 protein_coding Homo_sapiens 0 521

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