C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 31
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022364 Tbc1d31 10090 + 15:57912199-57970067 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022992 Tbc1d31-001 57912199-57970061 protein_coding
  ENSMUST00000110175 Tbc1d31-005 57912234-57959402 processed_transcript
  ENSMUST00000159775 Tbc1d31-007 57912239-57919948 nonsense_mediated_decay
  ENSMUST00000159801 Tbc1d31-002 57913005-57959482 retained_intron
  ENSMUST00000160098 Tbc1d31-003 57913855-57953904 retained_intron
  ENSMUST00000161329 Tbc1d31-006 57958413-57970067 protein_coding
  ENSMUST00000162157 Tbc1d31-004 57916013-57955217 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022992ENSMUST00000110175ENSMUST00000159775ENSMUST00000159801ENSMUST00000160098ENSMUST00000161329ENSMUST00000162157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022992 0.905±0.07 0.738±0.20 1.462±0.14 1.830±0.37 0.607±0.26 0.420±0.02 0.625±0.26 0.611±0.11 2.567±2.13 0.469±0.14 0.269±0.09 1.319±1.44 2.745±1.21 6.486±2.63
ENSMUST00000110175 1.308±0.06 2.311±0.46 N/A N/A 1.313±0.37 0.599±0.27 0.611±0.39 0.319±0.07 0.502±0.14 0.369±0.00 0.271±0.07 1.144±0.47 N/A N/A
ENSMUST00000159775 N/A N/A N/A N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159801 0.872±0.00 N/A N/A 0.372±0.00 1.934±0.00 0.374±0.00 N/A 0.281±0.09 1.513±0.49 N/A N/A 0.733±0.33 0.890±0.30 2.170±0.00
ENSMUST00000160098 N/A N/A N/A N/A 0.614±0.00 N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000161329 N/A N/A N/A N/A 2.106±0.79 0.660±0.19 N/A 0.907±0.00 2.485±0.00 N/A 0.425±0.08 N/A N/A N/A
ENSMUST00000162157 N/A N/A N/A N/A 0.362±0.00 0.193±0.00 N/A N/A N/A N/A 0.111±0.00 0.264±0.00 0.139±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005HY CIL_0005HY_0002 CGP 15:57869502-57970067
CIL_0005HX CIL_0005HX_0002 CGP 15:57912199-58011009

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005813 IEA centrosome
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074623 tbc1d31 TBC1 domain family, member 31 protein_coding Danio_rerio
ENSG00000156787 TBC1D31 TBC1 domain family, member 31 protein_coding Homo_sapiens

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