C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005HX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156787-ENSG00000147689 CGP 9606 8:123041968-123210079
GeneTranscriptPositionBiotype
ENSG00000136986 (DERL1)
derlin 1 		ENST00000259512 (DERL1-001) 123013164-123042423 protein_coding
ENST00000405944 (DERL1-004) 123014149-123042122 protein_coding
ENST00000419562 (DERL1-002) 123015165-123042302 protein_coding
ENST00000519018 (DERL1-006) 123015442-123025650 protein_coding
ENST00000523036 (DERL1-005) 123015446-123025772 protein_coding
ENST00000524119 (DERL1-003) 123014149-123030719 retained_intron
ENSG00000147689 (FAM83A)
family with sequence similarity 83, member A 		ENST00000276699 (FAM83A-002) 123182681-123210074 protein_coding
ENST00000518448 (FAM83A-001) 123179047-123209762 protein_coding
ENST00000520541 (FAM83A-005) 123179098-123182583 retained_intron
ENST00000521468 (FAM83A-004) 123183158-123199994 processed_transcript
ENST00000522648 (FAM83A-003) 123182681-123210078 protein_coding
ENST00000523412 (FAM83A-006) 123179114-123180719 processed_transcript
ENST00000523819 (FAM83A-007) 123178960-123180615 processed_transcript
ENST00000536633 (FAM83A-201) 123179047-123210079 protein_coding
ENSG00000156787 (TBC1D31)
TBC1 domain family, member 31 		ENST00000287380 (TBC1D31-001) 123072680-123152150 protein_coding
ENST00000327098 (TBC1D31-002) 123072713-123151954 protein_coding
ENST00000518099 (TBC1D31-007) 123072723-123101087 retained_intron
ENST00000518577 (TBC1D31-014) 123109334-123129172 nonsense_mediated_decay
ENST00000518684 (TBC1D31-011) 123074920-123093639 protein_coding
ENST00000518805 (TBC1D31-003) 123100953-123152153 protein_coding
ENST00000518866 (TBC1D31-016) 123127850-123142456 retained_intron
ENST00000519418 (TBC1D31-013) 123072682-123109620 protein_coding
ENST00000520368 (TBC1D31-012) 123041968-123084269 protein_coding
ENST00000521676 (TBC1D31-005) 123072759-123152153 protein_coding
ENST00000521914 (TBC1D31-009) 123093661-123104201 protein_coding
ENST00000521980 (TBC1D31-008) 123082508-123097848 retained_intron
ENST00000522276 (TBC1D31-010) 123073249-123097383 protein_coding
ENST00000522420 (TBC1D31-004) 123072713-123151964 protein_coding
ENST00000524307 (TBC1D31-006) 123072766-123152150 nonsense_mediated_decay
ENSG00000204949 (FAM83A-AS1)
FAM83A antisense RNA 1 		ENST00000517519 (FAM83A-AS1-002) 123201172-123202743 antisense
ENST00000520576 (FAM83A-AS1-001) 123201172-123202743 antisense
ENST00000523330 (FAM83A-AS1-003) 123201172-123202743 antisense
ENSG00000221461 (U3)
Small nucleolar RNA U3 		ENST00000408534 (U3.1-242) 123180310-123180525 snoRNA
ENSG00000253258 (RP11-539E17.5)
 ENST00000522383 (RP11-539E17.5-001) 123181638-123182788 antisense
ENSG00000253463 (HMGB1P19)
high mobility group box 1 pseudogene 19 		ENST00000517578 (HMGB1P19-001) 123123106-123123682 processed_pseudogene
CIL_0005HX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022364-ENSMUSG00000051225 CGP 10090 15:57912199-58011009
GeneTranscriptPositionBiotype
ENSMUSG00000022364 (Tbc1d31)
TBC1 domain family, member 31 		ENSMUST00000022992 (Tbc1d31-001) 57912199-57970061 protein_coding
ENSMUST00000110175 (Tbc1d31-005) 57912234-57959402 processed_transcript
ENSMUST00000159775 (Tbc1d31-007) 57912239-57919948 nonsense_mediated_decay
ENSMUST00000159801 (Tbc1d31-002) 57913005-57959482 retained_intron
ENSMUST00000160098 (Tbc1d31-003) 57913855-57953904 retained_intron
ENSMUST00000161329 (Tbc1d31-006) 57958413-57970067 protein_coding
ENSMUST00000162157 (Tbc1d31-004) 57916013-57955217 retained_intron
ENSMUSG00000051225 (Fam83a)
family with sequence similarity 83, member A 		ENSMUST00000050374 (Fam83a-002) 57985910-57995602 protein_coding
ENSMUST00000160942 (Fam83a-001) 57985419-58011009 protein_coding
ENSMUST00000161231 (Fam83a-003) 58002146-58010047 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HX_0001ENSG00000136986ENST00000259512ENST00000405944ENST00000419562ENST00000519018ENST00000523036ENST00000524119ENSG00000147689ENST00000276699ENST00000518448ENST00000520541ENST00000521468ENST00000522648ENST00000523412ENST00000523819ENST00000536633ENSG00000156787ENST00000287380ENST00000327098ENST00000518099ENST00000518577ENST00000518684ENST00000518805ENST00000518866ENST00000519418ENST00000520368ENST00000521676ENST00000521914ENST00000521980ENST00000522276ENST00000522420ENST00000524307ENSG00000204949ENST00000517519ENST00000520576ENST00000523330ENSG00000221461ENST00000408534ENSG00000253258ENST00000522383ENSG00000253463ENST00000517578CIL_0005HX_0002ENSMUSG00000022364ENSMUST00000022992ENSMUST00000110175ENSMUST00000159775ENSMUST00000159801ENSMUST00000160098ENSMUST00000161329ENSMUST00000162157ENSMUSG00000051225ENSMUST00000050374ENSMUST00000160942ENSMUST00000161231
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005HX_0001ENSG00000136986ENST00000259512ENST00000405944ENST00000524119ENSG00000147689ENST00000276699ENST00000518448ENST00000521468ENST00000522648ENST00000523412ENSG00000156787ENST00000287380ENST00000518805ENST00000522420ENSG00000204949ENST00000517519ENST00000520576ENST00000523330ENSG00000221461ENST00000408534ENSG00000253258ENST00000522383ENSG00000253463ENST00000517578CIL_0005HX_0002ENSMUSG00000022364ENSMUST00000022992ENSMUST00000110175ENSMUST00000159775ENSMUST00000159801ENSMUST00000160098ENSMUST00000161329ENSMUST00000162157ENSMUSG00000051225ENSMUST00000050374ENSMUST00000160942ENSMUST00000161231
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136986 ENST00000259512 N/A 27.532±0.00 N/A 3.107±0.00 N/A 5.337±3.29 1.926±0.00 9.745±6.79 2.615±0.00 N/A N/A 6.656±3.81 4.204±1.87 7.254±0.00
ENST00000405944 18.272±0.00 N/A 2.407±0.00 5.465±1.76 12.093±0.08 5.456±0.78 7.015±3.15 8.743±2.04 11.435±2.58 9.296±3.26 10.819±3.48 12.238±6.10 11.421±5.72 12.288±4.05
ENST00000419562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524119 N/A N/A 0.925±0.00 N/A N/A N/A N/A 1.015±0.00 N/A 1.622±0.00 N/A 1.580±0.00 N/A N/A
ENSG00000147689 ENST00000276699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.114±0.02
ENST00000518448 0.056±0.00 0.077±0.00 N/A 0.004±0.00 N/A 0.023±0.00 0.032±0.00 N/A 0.029±0.00 N/A N/A 0.063±0.00 0.028±0.00 0.120±0.00
ENST00000520541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521468 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A 1.048±0.00 N/A N/A
ENST00000522648 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A 0.874±0.00 1.427±0.58 0.303±0.00
ENST00000523412 N/A 0.156±0.00 N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156787 ENST00000287380 N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000327098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518684 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.336±0.00
ENST00000518866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522420 N/A N/A 0.624±0.00 1.729±0.00 N/A N/A N/A N/A 1.133±0.00 1.338±0.00 N/A 1.596±0.00 N/A N/A
ENST00000524307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204949 ENST00000517519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 0.081±0.00 0.107±0.00
ENST00000520576 N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A 0.182±0.00 N/A 0.264±0.00
ENST00000523330 0.055±0.00 N/A N/A 0.041±0.00 0.019±0.00 N/A N/A N/A 16.553±0.00 N/A N/A 0.045±0.00 N/A 0.100±0.00
ENSG00000221461 ENST00000408534 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253258 ENST00000522383 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253463 ENST00000517578 N/A N/A 0.421±0.00 0.093±0.00 0.733±0.00 0.991±0.00 N/A N/A 0.235±0.00 0.357±0.00 N/A 0.287±0.22 N/A 0.170±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022364 ENSMUST00000022992 0.905±0.07 0.738±0.20 1.462±0.14 1.830±0.37 0.607±0.26 0.420±0.02 0.625±0.26 0.611±0.11 2.567±2.13 0.469±0.14 0.269±0.09 1.319±1.44 2.745±1.21 6.486±2.63
ENSMUST00000110175 1.308±0.06 2.311±0.46 N/A N/A 1.313±0.37 0.599±0.27 0.611±0.39 0.319±0.07 0.502±0.14 0.369±0.00 0.271±0.07 1.144±0.47 N/A N/A
ENSMUST00000159775 N/A N/A N/A N/A N/A 0.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159801 0.872±0.00 N/A N/A 0.372±0.00 1.934±0.00 0.374±0.00 N/A 0.281±0.09 1.513±0.49 N/A N/A 0.733±0.33 0.890±0.30 2.170±0.00
ENSMUST00000160098 N/A N/A N/A N/A 0.614±0.00 N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000161329 N/A N/A N/A N/A 2.106±0.79 0.660±0.19 N/A 0.907±0.00 2.485±0.00 N/A 0.425±0.08 N/A N/A N/A
ENSMUST00000162157 N/A N/A N/A N/A 0.362±0.00 0.193±0.00 N/A N/A N/A N/A 0.111±0.00 0.264±0.00 0.139±0.00 N/A
ENSMUSG00000051225 ENSMUST00000050374 2.853±1.67 N/A N/A 0.043±0.00 1.037±0.35 0.048±0.00 0.169±0.12 0.128±0.05 0.135±0.05 0.355±0.00 N/A 0.317±0.21 0.060±0.03 N/A
ENSMUST00000160942 3.866±2.95 2.231±0.76 0.065±0.00 0.031±0.02 2.485±1.05 0.072±0.00 0.068±0.04 0.228±0.09 0.525±0.64 0.487±0.13 0.052±0.03 0.383±0.19 0.086±0.08 0.878±0.39
ENSMUST00000161231 8.046±6.66 1.593±0.00 0.914±0.17 N/A 6.028±1.35 0.150±0.05 0.339±0.18 0.299±0.16 0.445±0.38 1.309±0.58 0.244±0.16 1.120±0.54 0.159±0.12 2.289±0.53

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