C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TRM2 tRNA methyltransferase 2A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022721 Trmt2a 10090 + 16:18248679-18254772 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000059696 Trmt2a-006 18249002-18253502 retained_intron
  ENSMUST00000100099 Trmt2a-010 18249062-18253502 protein_coding
  ENSMUST00000115640 Trmt2a-002 18248883-18253502 protein_coding
  ENSMUST00000127239 Trmt2a-003 18248679-18253502 retained_intron
  ENSMUST00000128045 Trmt2a-009 18251422-18253501 protein_coding
  ENSMUST00000131211 Trmt2a-007 18252221-18253231 retained_intron
  ENSMUST00000140206 Trmt2a-001 18248883-18254772 protein_coding
  ENSMUST00000145112 Trmt2a-008 18250021-18253112 protein_coding
  ENSMUST00000147273 Trmt2a-005 18249009-18253508 retained_intron
  ENSMUST00000153292 Trmt2a-004 18249009-18253498 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100099ENSMUST00000115640ENSMUST00000147273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100099 N/A N/A N/A N/A 8.359±0.00 N/A N/A N/A N/A N/A 2.333±0.00 18.436±0.65 N/A N/A
ENSMUST00000115640 16.310±2.36 18.686±1.35 11.159±0.98 20.916±2.61 17.452±3.87 13.742±2.62 5.985±0.97 9.509±0.49 13.278±8.81 13.983±1.03 3.329±0.48 23.390±2.34 14.021±0.64 8.991±0.71
ENSMUST00000147273 N/A N/A N/A N/A 3.968±0.08 N/A N/A N/A N/A 4.691±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001510 IEA RNA methylation
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0006396 IEA RNA processing
GO:0008168 IEA methyltransferase activity
GO:0008173 IEA RNA methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002830 trmt2a trm2 tRNA methyltransferase 2 homolog A (S. cerevisiae) protein_coding Danio_rerio
ENSG00000099899 TRMT2A tRNA methyltransferase 2 homolog A (S. cerevisiae) protein_coding Homo_sapiens

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