C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: goosecoid homebox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022738 Gsc2 10090 - 16:17913107-17915059 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000012279 Gsc2-001 17913107-17915059 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverOvaryPlacentaTestisENSMUST00000012279
Transcript ID Adipose Brain Breast Liver Ovary Placenta Testis
ENSMUST00000012279 0.026±0.00 0.098±0.03 0.046±0.01 0.011±0.00 0.075±0.02 0.021±0.00 2.129±1.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086B CIL_00086B_0002 VISTA 16:17508169-18111091
CIL_000244 CIL_000244_0002 CGP 16:17913107-17928219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076491 GSC2 goosecoid homeobox 2 protein_coding Danio_rerio
ENSG00000063515 GSC2 goosecoid homeobox 2 protein_coding Homo_sapiens

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