C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000244_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000063515-ENSG00000100075 CGP 9606 22:19148576-19178830
GeneTranscriptPositionBiotype
ENSG00000063515 (GSC2)
goosecoid homeobox 2
ENST00000086933 (GSC2-001) 19148576-19150283 protein_coding
ENSG00000100075 (SLC25A1)
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1
ENST00000215882 (SLC25A1-001) 19175575-19178830 protein_coding
ENST00000451283 (SLC25A1-003) 19175593-19178521 protein_coding
ENST00000461267 (SLC25A1-005) 19176667-19178480 processed_transcript
ENST00000468824 (SLC25A1-004) 19177990-19178635 processed_transcript
ENST00000470922 (SLC25A1-002) 19175610-19178739 retained_intron
ENSG00000260924 (LINC01311)
long intergenic non-protein coding RNA 1311
ENST00000565162 (LINC01311-001) 19171395-19172839 antisense
CIL_000244_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022738-ENSMUSG00000003528 CGP 10090 16:17913107-17928219
GeneTranscriptPositionBiotype
ENSMUSG00000003528 (Slc25a1)
solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
ENSMUST00000003622 (Slc25a1-001) 17925211-17928219 protein_coding
ENSMUST00000129270 (Slc25a1-006) 17925682-17927343 retained_intron
ENSMUST00000131507 (Slc25a1-004) 17925716-17927416 protein_coding
ENSMUST00000142022 (Slc25a1-005) 17927150-17928129 retained_intron
ENSMUST00000147384 (Slc25a1-002) 17927417-17928209 retained_intron
ENSMUST00000150925 (Slc25a1-003) 17926266-17927887 retained_intron
ENSMUSG00000022738 (Gsc2)
goosecoid homebox 2
ENSMUST00000012279 (Gsc2-001) 17913107-17915059 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000244_0001ENSG00000063515ENST00000086933ENSG00000100075ENST00000215882ENST00000451283ENST00000461267ENST00000468824ENST00000470922ENSG00000260924ENST00000565162CIL_000244_0002ENSMUSG00000003528ENSMUST00000003622ENSMUST00000129270ENSMUST00000131507ENSMUST00000142022ENSMUST00000147384ENSMUST00000150925ENSMUSG00000022738ENSMUST00000012279
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000244_0001ENSG00000063515ENST00000086933ENSG00000100075ENST00000215882ENST00000451283ENST00000461267ENST00000470922ENSG00000260924ENST00000565162CIL_000244_0002ENSMUSG00000003528ENSMUST00000003622ENSMUST00000129270ENSMUST00000131507ENSMUST00000142022ENSMUSG00000022738ENSMUST00000012279
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063515 ENST00000086933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.111±0.00 2.353±0.00
ENSG00000100075 ENST00000215882 25.580±0.00 7.520±0.00 1.145±0.00 8.631±0.00 27.154±23.42 4.240±1.86 2.404±1.72 16.916±4.41 22.285±20.30 9.478±6.80 2.168±0.00 21.785±15.22 26.554±2.63 5.019±0.58
ENST00000451283 42.655±0.00 27.399±0.00 3.238±0.00 1.043±0.00 86.834±0.00 27.977±0.00 N/A 7.474±0.00 N/A 6.736±0.00 1.338±0.00 31.452±8.16 38.283±6.62 28.921±8.79
ENST00000461267 N/A N/A N/A N/A N/A N/A N/A 3.510±0.00 N/A N/A N/A N/A N/A N/A
ENST00000468824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470922 N/A 4.658±0.00 N/A 0.459±0.00 1.231±0.00 8.837±0.00 6.521±0.00 29.991±0.00 32.973±0.00 20.237±0.00 6.552±0.00 N/A N/A 12.127±0.00
ENSG00000260924 ENST00000565162 0.189±0.00 0.560±0.00 N/A 0.201±0.00 0.388±0.04 0.132±0.01 0.140±0.00 0.450±0.27 0.204±0.01 0.146±0.00 0.055±0.00 0.808±0.41 0.211±0.14 0.584±0.39
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003528 ENSMUST00000003622 376.315±50.75 343.266±70.38 29.230±3.02 38.445±0.96 604.432±130.45 81.235±7.91 18.721±8.88 126.638±6.19 90.295±58.64 82.474±2.34 2.112±1.52 84.201±32.13 10.679±5.88 18.640±1.39
ENSMUST00000129270 N/A N/A N/A 12.488±0.00 N/A N/A N/A N/A N/A N/A 0.875±0.24 29.530±4.75 7.371±2.30 8.229±0.00
ENSMUST00000131507 N/A N/A N/A 14.224±0.00 N/A N/A N/A N/A N/A N/A N/A 32.309±1.65 5.905±2.23 2.596±0.00
ENSMUST00000142022 N/A N/A N/A 12.637±0.00 N/A N/A N/A N/A N/A N/A N/A 30.357±0.00 9.245±1.74 7.429±0.00
ENSMUST00000147384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022738 ENSMUST00000012279 0.026±0.00 N/A N/A 0.098±0.03 0.046±0.01 N/A N/A N/A 0.011±0.00 N/A N/A 0.075±0.02 0.021±0.00 2.129±1.71

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