C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022793 B4galt4 10090 + 16:38742264-38769049 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023482 B4galt4-001 38742264-38769049 protein_coding
  ENSMUST00000114708 B4galt4-005 38760805-38768311 protein_coding
  ENSMUST00000114710 B4galt4-004 38760735-38768282 protein_coding
  ENSMUST00000114711 B4galt4-003 38760735-38769049 protein_coding
  ENSMUST00000114712 B4galt4-002 38742266-38768848 protein_coding
  ENSMUST00000154902 B4galt4-006 38742296-38768848 nonsense_mediated_decay
  ENSMUST00000161010 B4galt4-007 38762891-38766278 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023482ENSMUST00000114708ENSMUST00000114710ENSMUST00000114711ENSMUST00000114712ENSMUST00000154902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023482 2.981±0.69 2.762±0.95 3.724±0.78 2.076±0.14 1.144±0.22 8.797±3.26 1.264±0.68 1.440±0.24 0.353±0.16 5.643±0.84 0.580±0.39 5.371±3.05 6.802±4.78 0.197±0.14
ENSMUST00000114708 N/A N/A N/A 4.464±0.00 1.014±0.00 N/A N/A N/A N/A N/A N/A 18.042±0.00 44.704±10.86 0.355±0.00
ENSMUST00000114710 N/A N/A N/A N/A 0.862±0.00 N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A N/A
ENSMUST00000114711 N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A 0.239±0.02
ENSMUST00000114712 1.776±1.21 2.353±0.81 2.921±0.15 2.297±0.61 1.624±0.17 7.559±1.03 1.540±0.60 1.347±0.16 0.416±0.29 8.008±2.14 0.865±0.42 5.459±1.26 5.920±3.58 0.216±0.11
ENSMUST00000154902 1.077±0.04 N/A 0.837±0.00 1.647±0.50 1.564±0.00 N/A 1.047±0.16 N/A 0.260±0.10 N/A 0.617±0.24 4.405±0.50 3.309±2.52 0.130±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003M8 CIL_0003M8_0002 CGP 16:38598340-38769049

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003945 IEA N-acetyllactosamine synthase activity
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004798 b4galt4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 protein_coding Danio_rerio
ENSG00000121578 B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 protein_coding Homo_sapiens

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