C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003M8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059472-ENSDARG00000004798 CGP 7955 5:70667694-70747821
GeneTranscriptPositionBiotype
ENSDARG00000004798 (b4galt4)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 		ENSDART00000022903 (b4galt4-001) 70733309-70747394 protein_coding
ENSDART00000156478 (b4galt4-201) 70733932-70747821 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003M8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022799-ENSMUSG00000022793 CGP 10090 16:38598340-38769049
GeneTranscriptPositionBiotype
ENSMUSG00000022793 (B4galt4)
UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 		ENSMUST00000023482 (B4galt4-001) 38742264-38769049 protein_coding
ENSMUST00000114708 (B4galt4-005) 38760805-38768311 protein_coding
ENSMUST00000114710 (B4galt4-004) 38760735-38768282 protein_coding
ENSMUST00000114711 (B4galt4-003) 38760735-38769049 protein_coding
ENSMUST00000114712 (B4galt4-002) 38742266-38768848 protein_coding
ENSMUST00000154902 (B4galt4-006) 38742296-38768848 nonsense_mediated_decay
ENSMUST00000161010 (B4galt4-007) 38762891-38766278 retained_intron
ENSMUSG00000022799 (Arhgap31)
Rho GTPase activating protein 31 		ENSMUST00000023487 (Arhgap31-001) 38598340-38713274 protein_coding
ENSMUST00000124866 (Arhgap31-002) 38623163-38712899 processed_transcript
ENSMUST00000132697 (Arhgap31-003) 38637719-38712898 retained_intron
ENSMUSG00000081651 (Gm15530)
predicted gene 15530 		ENSMUST00000122206 (Gm15530-001) 38685315-38685869 processed_pseudogene
ENSMUSG00000083183 (Gm15575)
predicted gene 15575 		ENSMUST00000119414 (Gm15575-001) 38748729-38750309 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M8_0001ENSDARG00000004798ENSDART00000022903ENSDART00000156478CIL_0003M8_0002ENSMUSG00000022793ENSMUST00000023482ENSMUST00000114708ENSMUST00000114710ENSMUST00000114711ENSMUST00000114712ENSMUST00000154902ENSMUST00000161010ENSMUSG00000022799ENSMUST00000023487ENSMUST00000124866ENSMUST00000132697ENSMUSG00000081651ENSMUST00000122206ENSMUSG00000083183ENSMUST00000119414
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003M8_0001ENSDARG00000004798ENSDART00000022903ENSDART00000156478CIL_0003M8_0002ENSMUSG00000022793ENSMUST00000023482ENSMUST00000114708ENSMUST00000114710ENSMUST00000114711ENSMUST00000114712ENSMUST00000154902ENSMUSG00000022799ENSMUST00000023487ENSMUSG00000081651ENSMUST00000122206ENSMUSG00000083183ENSMUST00000119414
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004798 ENSDART00000022903 N/A N/A N/A 1.052±0.55 N/A N/A 1.518±0.28 1.688±0.90 N/A N/A N/A N/A N/A N/A
ENSDART00000156478 N/A N/A N/A N/A N/A N/A 0.888±0.00 N/A 0.300±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022793 ENSMUST00000023482 2.981±0.69 2.762±0.95 3.724±0.78 2.076±0.14 1.144±0.22 8.797±3.26 1.264±0.68 1.440±0.24 0.353±0.16 5.643±0.84 0.580±0.39 5.371±3.05 6.802±4.78 0.197±0.14
ENSMUST00000114708 N/A N/A N/A 4.464±0.00 1.014±0.00 N/A N/A N/A N/A N/A N/A 18.042±0.00 44.704±10.86 0.355±0.00
ENSMUST00000114710 N/A N/A N/A N/A 0.862±0.00 N/A N/A N/A N/A N/A 0.415±0.00 N/A N/A N/A
ENSMUST00000114711 N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A 0.239±0.02
ENSMUST00000114712 1.776±1.21 2.353±0.81 2.921±0.15 2.297±0.61 1.624±0.17 7.559±1.03 1.540±0.60 1.347±0.16 0.416±0.29 8.008±2.14 0.865±0.42 5.459±1.26 5.920±3.58 0.216±0.11
ENSMUST00000154902 1.077±0.04 N/A 0.837±0.00 1.647±0.50 1.564±0.00 N/A 1.047±0.16 N/A 0.260±0.10 N/A 0.617±0.24 4.405±0.50 3.309±2.52 0.130±0.05
ENSMUST00000161010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022799 ENSMUST00000023487 7.942±1.15 4.791±0.48 4.542±0.87 1.594±0.29 6.696±1.39 2.007±0.22 5.152±1.03 2.955±0.13 0.628±0.17 25.188±2.58 3.447±0.42 14.920±1.72 13.659±6.59 0.714±0.17
ENSMUST00000124866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081651 ENSMUST00000122206 0.184±0.00 N/A 0.119±0.03 0.066±0.01 N/A N/A N/A N/A 0.019±0.00 0.251±0.10 N/A 0.063±0.00 0.217±0.10 N/A
ENSMUSG00000083183 ENSMUST00000119414 0.099±0.00 0.183±0.10 0.095±0.03 0.028±0.00 0.105±0.06 0.217±0.12 0.174±0.13 0.034±0.00 0.011±0.01 0.562±0.00 0.013±0.00 0.293±0.19 0.090±0.03 0.025±0.00

Loading