C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: beta galactoside alpha 2,6 sialyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022885 St6gal1 10090 + 16:23224740-23360350 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023601 St6gal1-001 23224740-23360348 protein_coding
  ENSMUST00000115335 St6gal1-004 23290470-23358595 protein_coding
  ENSMUST00000128050 St6gal1-003 23269629-23321179 protein_coding
  ENSMUST00000144919 St6gal1-005 23358316-23360348 processed_transcript
  ENSMUST00000152449 St6gal1-002 23226021-23321071 processed_transcript
  ENSMUST00000178797 St6gal1-201 23226021-23360350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023601ENSMUST00000144919ENSMUST00000152449ENSMUST00000178797
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023601 5.972±2.64 8.147±1.01 1.777±0.23 8.310±5.10 9.525±5.23 2.663±0.32 2.388±0.02 3.431±0.52 3.014±0.85 10.848±1.97 0.436±0.21 15.632±5.00 5.006±1.88 1.459±0.71
ENSMUST00000144919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.574±0.00 N/A N/A N/A
ENSMUST00000152449 N/A 10.606±0.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178797 1.822±0.57 3.175±0.16 N/A 1.879±0.26 5.622±3.01 N/A 0.657±0.11 1.193±0.10 2.901±0.00 3.234±0.31 0.873±0.32 8.899±7.04 8.661±3.45 0.741±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LA CIL_0008LA_0002 VISTA 16:22937415-23544553

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003835 IMP beta-galactoside alpha-2,6-sialyltransferase activity
GO:0006054 ISS N-acetylneuraminate metabolic process
GO:0006486 IMP protein glycosylation
GO:0008373 IDA sialyltransferase activity
GO:0018279 ISS protein N-linked glycosylation via asparagine
GO:0030173 IEA integral component of Golgi membrane
GO:0070062 IEA extracellular vesicular exosome
GO:0097503 IMP:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044514 st6gal1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 protein_coding Danio_rerio
ENSG00000073849 ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 protein_coding Homo_sapiens

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