C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: extraembryonic, spermatogenesis, homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023443 Esx1 10090 - X:137115397-137122083 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074698 Esx1-002 137115397-137120326 protein_coding
  ENSMUST00000113066 Esx1-001 137115397-137120171 protein_coding
  ENSMUST00000155283 Esx1-003 137118511-137122083 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyPlacentaTestisENSMUST00000074698ENSMUST00000113066ENSMUST00000155283
Transcript ID Heart Kidney Placenta Testis
ENSMUST00000074698 0.029±0.00 N/A 3.536±0.12 2.399±1.03
ENSMUST00000113066 N/A N/A 10.474±5.15 0.701±0.48
ENSMUST00000155283 N/A 0.166±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006A4 CIL_0006A4_0002 CGP X:137049594-137122083
CIL_0006A5 CIL_0006A5_0002 CGP X:137115397-138846946

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IEA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IEA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001568 IMP blood vessel development
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0043565 IEA sequence-specific DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0051726 IEA regulation of cell cycle
GO:0060713 IMP labyrinthine layer morphogenesis
GO:0060716 IMP labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000123576 ESX1 ESX homeobox 1 protein_coding Homo_sapiens

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