C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB12, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023460 Rab12 10090 - 17:66494512-66519717 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070538 Rab12-001 66494512-66519717 protein_coding
  ENSMUST00000135620 Rab12-002 66500349-66519377 processed_transcript
  ENSMUST00000146279 Rab12-003 66505788-66519710 retained_intron
  ENSMUST00000155026 Rab12-004 66497490-66500319 retained_intron
  ENSMUST00000167962 Rab12-201 66494512-66519670 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070538ENSMUST00000146279ENSMUST00000167962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070538 N/A N/A N/A N/A N/A 6.225±1.40 8.298±0.00 3.872±0.00 3.491±1.61 N/A N/A 8.919±0.00 N/A N/A
ENSMUST00000146279 9.447±0.00 35.234±15.93 N/A N/A 9.616±0.13 9.363±4.44 N/A 5.239±0.00 N/A 9.459±0.00 N/A 26.080±5.54 N/A N/A
ENSMUST00000167962 15.774±2.77 8.103±1.30 44.357±2.35 31.360±3.18 12.554±2.17 6.230±0.53 44.638±3.78 11.759±2.19 5.478±2.03 32.828±2.15 85.202±16.95 12.892±7.31 24.475±7.31 3.636±0.86

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005764 IDA lysosome
GO:0005776 IDA autophagic vacuole
GO:0005794 IEA Golgi apparatus
GO:0006914 IEA autophagy
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008333 IMP endosome to lysosome transport
GO:0015031 IEA protein transport
GO:0016239 IMP positive regulation of macroautophagy
GO:0019003 ISS GDP binding
GO:0030141 IEA secretory granule
GO:0031410 IEA cytoplasmic vesicle
GO:0044257 IMP cellular protein catabolic process
GO:0055038 IDA recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089428 rab12 RAB12, member RAS oncogene family protein_coding Danio_rerio
ENSG00000206418 RAB12 RAB12, member RAS oncogene family protein_coding Homo_sapiens

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