C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphatidylinositol glycan anchor biosynthesis, class X
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023791 Pigx 10090 - 16:32084418-32099738 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096109 Pigx-001 32084424-32099738 protein_coding
  ENSMUST00000133584 Pigx-008 32087296-32099696 nonsense_mediated_decay
  ENSMUST00000135677 Pigx-005 32092342-32097525 retained_intron
  ENSMUST00000136643 Pigx-009 32087502-32099700 nonsense_mediated_decay
  ENSMUST00000143011 Pigx-007 32084424-32099704 processed_transcript
  ENSMUST00000144216 Pigx-006 32097044-32099711 nonsense_mediated_decay
  ENSMUST00000147003 Pigx-004 32085288-32099693 nonsense_mediated_decay
  ENSMUST00000147688 Pigx-010 32084459-32099707 nonsense_mediated_decay
  ENSMUST00000151250 Pigx-003 32084420-32088155 processed_transcript
  ENSMUST00000155966 Pigx-002 32084438-32099728 protein_coding
  ENSMUST00000189013 Pigx-201 32084418-32099727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096109ENSMUST00000133584ENSMUST00000135677ENSMUST00000136643ENSMUST00000147688ENSMUST00000151250ENSMUST00000155966ENSMUST00000189013
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096109 10.470±2.72 3.838±0.00 18.396±3.14 20.225±5.64 10.926±1.47 10.249±4.54 4.452±0.25 11.450±1.77 9.841±4.76 8.886±0.60 1.757±0.65 11.293±6.09 14.501±6.54 3.391±0.22
ENSMUST00000133584 N/A 6.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135677 N/A N/A N/A 0.813±0.00 N/A N/A N/A N/A N/A N/A N/A 1.555±0.00 N/A N/A
ENSMUST00000136643 N/A 18.750±5.84 N/A N/A 10.824±0.89 9.963±0.00 N/A N/A 2.540±0.00 N/A N/A 10.674±0.00 N/A N/A
ENSMUST00000147688 N/A 4.889±1.15 N/A 3.107±0.00 8.036±0.00 11.375±3.98 N/A N/A 2.450±0.00 N/A 1.272±0.33 9.507±3.83 15.578±0.30 N/A
ENSMUST00000151250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.632±0.45 15.306±1.77 N/A
ENSMUST00000155966 4.059±0.01 6.821±2.51 N/A 1.957±0.00 N/A 12.090±0.00 2.100±0.00 N/A 4.732±0.00 N/A 1.772±0.66 7.232±3.19 6.562±2.37 0.777±0.49
ENSMUST00000189013 9.618±0.15 10.396±3.85 9.673±1.16 9.840±2.61 6.195±1.65 10.473±1.29 2.724±0.23 6.136±0.95 3.508±1.40 5.004±1.21 1.443±0.02 9.239±3.14 8.242±1.19 1.529±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003W8 CIL_0003W8_0002 CGP 16:32016290-32099738
CIL_0003O8 CIL_0003O8_0003 CGP 16:32084418-32108069

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063559 pigx phosphatidylinositol glycan anchor biosynthesis, class X protein_coding Danio_rerio
ENSG00000163964 PIGX phosphatidylinositol glycan anchor biosynthesis, class X protein_coding Homo_sapiens

Loading