C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147688 Pigx-010 ENSMUSG00000023791 10090 - 16:32084459-32099707 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverMuscleOvaryPlacentaENSMUST00000147688
Transcript ID Adrenal Brain Breast Colon Liver Muscle Ovary Placenta
ENSMUST00000147688 4.889±1.15 3.107±0.00 8.036±0.00 11.375±3.98 2.450±0.00 1.272±0.33 9.507±3.83 15.578±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003W8 CIL_0003W8_0002 CGP 16:32016290-32099738
CIL_0003O8 CIL_0003O8_0003 CGP 16:32084418-32108069

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296333 PIGX-001 protein_coding Homo_sapiens 0 237
ENST00000392391 PIGX-002 protein_coding Homo_sapiens 0 237
ENST00000415832 PIGX-003 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000421265 PIGX-008 protein_coding Homo_sapiens 0 237
ENST00000426755 PIGX-009 protein_coding Homo_sapiens 0 237
ENST00000451319 PIGX-006 protein_coding Homo_sapiens 0 237
ENST00000457284 PIGX-005 nonsense_mediated_decay Homo_sapiens 0 237

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