C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTP binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023952 Gtpbp2 10090 + 17:46161032-46169370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024748 Gtpbp2-001 46161032-46169370 protein_coding
  ENSMUST00000163941 Gtpbp2-012 46165778-46167332 retained_intron
  ENSMUST00000164338 Gtpbp2-005 46161049-46163505 processed_transcript
  ENSMUST00000165686 Gtpbp2-003 46161161-46162158 processed_transcript
  ENSMUST00000166252 Gtpbp2-013 46166431-46168234 nonsense_mediated_decay
  ENSMUST00000166563 Gtpbp2-006 46161111-46164307 protein_coding
  ENSMUST00000166663 Gtpbp2-017 46167636-46168410 retained_intron
  ENSMUST00000166701 Gtpbp2-015 46167231-46168394 protein_coding
  ENSMUST00000167404 Gtpbp2-008 46163033-46164821 retained_intron
  ENSMUST00000167681 Gtpbp2-014 46166988-46168211 retained_intron
  ENSMUST00000169383 Gtpbp2-002 46161032-46169368 nonsense_mediated_decay
  ENSMUST00000169778 Gtpbp2-011 46165696-46167882 retained_intron
  ENSMUST00000169798 Gtpbp2-016 46166867-46168021 retained_intron
  ENSMUST00000169918 Gtpbp2-010 46163318-46165188 retained_intron
  ENSMUST00000169955 Gtpbp2-009 46163226-46165795 processed_transcript
  ENSMUST00000171901 Gtpbp2-007 46161295-46164750 processed_transcript
  ENSMUST00000172170 Gtpbp2-004 46161066-46169336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024748ENSMUST00000169383ENSMUST00000169778ENSMUST00000169955ENSMUST00000172170
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024748 21.765±4.54 N/A 33.770±5.21 27.258±18.34 17.795±0.00 27.333±8.29 22.593±4.24 9.970±2.58 22.970±15.59 17.163±2.88 19.025±1.30 8.194±2.69 11.810±6.31 33.034±15.51
ENSMUST00000169383 14.751±4.24 13.268±5.33 N/A N/A 30.306±2.89 50.734±20.02 8.441±0.00 10.383±2.74 11.379±5.49 28.576±2.81 N/A 12.798±6.90 2.612±0.00 7.926±3.86
ENSMUST00000169778 N/A N/A N/A N/A N/A N/A 16.847±0.00 N/A N/A N/A N/A 18.840±2.17 N/A N/A
ENSMUST00000169955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.514±0.00 18.317±0.00
ENSMUST00000172170 N/A 12.200±3.31 N/A N/A 10.314±0.61 N/A N/A 7.680±0.00 3.484±0.07 N/A N/A 8.948±1.22 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0006184 IEA GTP catabolic process
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071059 gtpbp2 GTP binding protein 2 protein_coding Danio_rerio
ENSG00000172432 GTPBP2 GTP binding protein 2 protein_coding Homo_sapiens

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