C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024748 Gtpbp2-001 ENSMUSG00000023952 10090 + 17:46161032-46169370 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024748
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024748 21.765±4.54 33.770±5.21 27.258±18.34 17.795±0.00 27.333±8.29 22.593±4.24 9.970±2.58 22.970±15.59 17.163±2.88 19.025±1.30 8.194±2.69 11.810±6.31 33.034±15.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0002 VISTA 17:45708824-46310190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 ISS GTP binding
GO:0006184 IEA GTP catabolic process
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307114 GTPBP2-201 protein_coding Homo_sapiens 0 2815
ENST00000307126 GTPBP2-011 protein_coding Homo_sapiens 0 3055
ENST00000419497 GTPBP2-004 protein_coding Homo_sapiens 0 497
ENST00000432918 GTPBP2-005 protein_coding Homo_sapiens 0 699
ENST00000442748 GTPBP2-009 protein_coding Homo_sapiens 0 1327
ENST00000452781 GTPBP2-006 protein_coding Homo_sapiens 0 909
ENST00000476510 GTPBP2-001 processed_transcript Homo_sapiens 0 2815
ENST00000480263 GTPBP2-010 processed_transcript Homo_sapiens 0 479

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