C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: progastricsin (pepsinogen C)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023987 Pgc 10090 + 17:47726842-47734482 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024782 Pgc-001 47726842-47734482 protein_coding
  ENSMUST00000144955 Pgc-002 47726844-47732393 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024782ENSMUST00000144955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024782 0.202±0.05 7.924±7.22 0.055±0.00 0.009±0.00 0.289±0.06 0.384±0.17 0.192±0.04 0.300±0.14 0.091±0.06 0.879±0.13 0.143±0.03 4.762±4.65 10.719±15.13 0.206±0.09
ENSMUST00000144955 N/A N/A N/A N/A N/A N/A N/A 0.216±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000963 CIL_000963_0002 VISTA 17:47571879-48173076
CIL_00093V CIL_00093V_0002 VISTA 17:47614773-48215356
CIL_0008XI CIL_0008XI_0002 VISTA 17:47688296-48291797
CIL_0008IB CIL_0008IB_0002 VISTA 17:47708185-48309224
CIL_0007QG CIL_0007QG_0002 VISTA 17:47710565-48311720

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0006508 IEA proteolysis
GO:0007586 IEA digestion
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052792 nots nothepsin protein_coding Danio_rerio
ENSG00000096088 PGC progastricsin (pepsinogen C) protein_coding Homo_sapiens

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