C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/threonine kinase 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024006 Stk38 10090 - 17:28970885-29007945 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009138 Stk38-001 28970885-29007937 protein_coding
  ENSMUST00000119274 Stk38-002 28972237-29007937 protein_coding
  ENSMUST00000125070 Stk38-010 28974343-28980010 processed_transcript
  ENSMUST00000126619 Stk38-012 28977397-28979745 processed_transcript
  ENSMUST00000126671 Stk38-014 28973092-28974719 processed_transcript
  ENSMUST00000126893 Stk38-003 28979766-29007945 processed_transcript
  ENSMUST00000129094 Stk38-007 28987933-28991418 processed_transcript
  ENSMUST00000140355 Stk38-013 28974343-28979475 processed_transcript
  ENSMUST00000141431 Stk38-009 28972939-28982186 retained_intron
  ENSMUST00000142366 Stk38-005 28991405-29007735 processed_transcript
  ENSMUST00000142923 Stk38-011 28974571-28979760 processed_transcript
  ENSMUST00000144299 Stk38-008 28974282-28982475 retained_intron
  ENSMUST00000144516 Stk38-006 28983550-29000055 retained_intron
  ENSMUST00000145298 Stk38-004 28997564-29007896 processed_transcript
  ENSMUST00000156732 Stk38-015 28971017-28973077 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009138ENSMUST00000119274ENSMUST00000126893ENSMUST00000156732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009138 14.321±5.80 13.103±2.11 19.479±0.24 12.443±7.33 19.371±11.50 19.549±5.92 2.866±1.26 11.160±3.87 11.199±3.25 15.244±4.99 5.553±1.41 10.956±5.08 17.714±2.23 5.185±0.56
ENSMUST00000119274 N/A N/A N/A N/A N/A 9.146±0.00 N/A N/A N/A N/A N/A 9.349±3.62 27.741±0.32 N/A
ENSMUST00000126893 N/A 42.174±0.00 N/A N/A 33.887±8.15 27.724±6.37 N/A N/A N/A N/A N/A 30.258±17.87 N/A N/A
ENSMUST00000156732 23.614±2.26 20.965±1.01 N/A N/A 40.008±7.16 29.229±2.79 9.085±2.98 23.660±3.85 14.822±3.04 27.175±3.74 N/A 19.519±5.27 N/A 7.650±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YA CIL_0002YA_0002 CGP 17:28951950-29007945

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 ISS magnesium ion binding
GO:0004674 ISS protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 ISS ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0006468 ISS protein phosphorylation
GO:0031435 IEA mitogen-activated protein kinase kinase kinase binding
GO:0035556 ISS intracellular signal transduction
GO:0043407 ISS negative regulation of MAP kinase activity
GO:0070688 IEA MLL5-L complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018516 stk38b serine/threonine kinase 38b protein_coding Danio_rerio
ENSG00000112079 STK38 serine/threonine kinase 38 protein_coding Homo_sapiens

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