C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: THO complex 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024287 Thoc1 10090 + 18:9958180-9995484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025137 Thoc1-201 9958180-9995484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025137 2.576±0.73 2.263±0.16 8.269±1.62 7.416±4.56 1.495±0.28 1.560±0.16 1.566±0.07 1.848±0.42 5.778±4.55 2.205±0.64 1.880±0.23 3.320±2.38 8.753±2.26 5.184±1.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015D CIL_00015D_0002 CGP 18:9958180-10045119

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000018 ISS regulation of DNA recombination
GO:0000346 IEA transcription export complex
GO:0000347 IEA THO complex
GO:0000445 IEA THO complex part of transcription export complex
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0006406 ISS mRNA export from nucleus
GO:0006915 RCA apoptotic process
GO:0007165 IEA signal transduction
GO:0008380 IEA RNA splicing
GO:0031297 ISS replication fork processing
GO:0032784 IEA regulation of DNA-templated transcription, elongation
GO:0032786 ISS positive regulation of DNA-templated transcription, elongation
GO:0042981 RCA regulation of apoptotic process
GO:0045171 IEA intercellular bridge
GO:0046784 IEA viral mRNA export from host cell nucleus
GO:0048297 IMP negative regulation of isotype switching to IgA isotypes
GO:2000002 ISS negative regulation of DNA damage checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088246 thoc1 THO complex 1 protein_coding Danio_rerio
ENSG00000079134 THOC1 THO complex 1 protein_coding Homo_sapiens

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