C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024299 Adamts10 10090 + 17:33524204-33553782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087623 Adamts10-001 33524204-33553768 protein_coding
  ENSMUST00000172922 Adamts10-007 33528314-33553448 nonsense_mediated_decay
  ENSMUST00000173013 Adamts10-006 33528314-33553448 nonsense_mediated_decay
  ENSMUST00000173030 Adamts10-005 33524226-33553768 nonsense_mediated_decay
  ENSMUST00000173241 Adamts10-004 33524209-33553767 nonsense_mediated_decay
  ENSMUST00000173813 Adamts10-013 33531741-33543225 processed_transcript
  ENSMUST00000173931 Adamts10-002 33524204-33553768 nonsense_mediated_decay
  ENSMUST00000173972 Adamts10-010 33537719-33553770 retained_intron
  ENSMUST00000174104 Adamts10-009 33537336-33553768 retained_intron
  ENSMUST00000174170 Adamts10-012 33524210-33529164 retained_intron
  ENSMUST00000174348 Adamts10-008 33531632-33553767 nonsense_mediated_decay
  ENSMUST00000174666 Adamts10-011 33543526-33553782 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087623ENSMUST00000173013ENSMUST00000173030ENSMUST00000173241ENSMUST00000173931ENSMUST00000173972ENSMUST00000174104ENSMUST00000174170ENSMUST00000174666
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087623 10.907±2.31 5.084±1.46 7.411±0.00 7.359±0.17 7.670±1.04 4.004±1.45 4.313±0.84 3.186±0.66 1.126±0.37 25.584±3.62 0.737±0.00 20.913±6.55 1.683±0.33 0.658±0.03
ENSMUST00000173013 N/A N/A 4.576±0.00 1.058±0.00 N/A N/A N/A N/A N/A N/A 0.711±0.28 12.551±1.67 1.680±0.35 0.383±0.00
ENSMUST00000173030 N/A N/A N/A N/A N/A N/A N/A N/A 0.693±0.00 N/A N/A N/A N/A 0.685±0.00
ENSMUST00000173241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A 0.601±0.00 N/A
ENSMUST00000173931 11.778±4.80 4.798±1.23 13.139±0.00 11.134±1.53 8.266±4.14 5.036±0.50 4.624±1.27 4.008±1.04 1.759±0.92 25.538±8.07 1.533±0.35 25.051±9.56 1.531±0.20 0.626±0.06
ENSMUST00000173972 6.855±1.21 3.868±0.59 6.724±2.42 7.322±1.86 6.876±1.05 2.521±0.21 3.158±0.01 1.932±0.36 0.772±0.29 19.901±2.25 0.517±0.11 14.444±5.09 1.407±0.18 0.645±0.15
ENSMUST00000174104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00
ENSMUST00000174170 N/A 15.089±3.70 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174666 8.871±0.56 5.955±0.48 10.228±0.94 N/A 12.891±1.45 6.088±0.83 N/A 3.021±0.84 1.266±0.45 22.679±4.76 N/A 27.388±3.55 1.678±0.12 0.629±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001527 ISS microfibril
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0031012 ISS extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075188 adamts10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 protein_coding Danio_rerio
ENSG00000142303 ADAMTS10 ADAM metallopeptidase with thrombospondin type 1 motif, 10 protein_coding Homo_sapiens

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