C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (zinc transporter), member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024327 Slc39a7 10090 - 17:34028267-34031690 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025186 Slc39a7-001 34028269-34031544 protein_coding
  ENSMUST00000167145 Slc39a7-005 34029846-34031028 retained_intron
  ENSMUST00000169397 Slc39a7-201 34028267-34031690 protein_coding
  ENSMUST00000170491 Slc39a7-003 34028273-34031648 retained_intron
  ENSMUST00000171872 Slc39a7-004 34030174-34031656 protein_coding
  ENSMUST00000173810 Slc39a7-007 34030593-34031682 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025186ENSMUST00000167145ENSMUST00000169397ENSMUST00000170491ENSMUST00000171872
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025186 39.538±13.39 49.041±3.88 35.548±2.57 44.381±14.07 36.052±10.12 54.265±7.21 16.460±3.44 26.168±2.21 28.714±5.41 44.607±1.02 9.832±1.33 85.852±15.99 68.626±21.79 11.803±1.02
ENSMUST00000167145 N/A N/A N/A 48.449±0.00 N/A N/A N/A N/A N/A N/A N/A 107.178±0.00 101.509±12.13 21.766±0.00
ENSMUST00000169397 17.483±1.36 N/A N/A 15.641±0.58 19.266±6.86 20.022±0.71 8.178±0.91 18.439±3.79 11.941±3.48 17.793±0.66 8.486±1.77 52.908±7.57 11.560±0.00 4.292±0.00
ENSMUST00000170491 18.727±8.84 N/A 20.673±2.75 11.988±1.98 11.571±2.65 19.389±1.07 6.617±0.63 N/A 13.778±3.39 16.582±2.45 8.174±1.85 17.682±2.98 21.113±4.14 5.198±0.80
ENSMUST00000171872 N/A 80.538±5.64 N/A N/A 34.704±4.97 49.012±4.74 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006829 IEA zinc ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036388 slc39a7 solute carrier family 39 (zinc transporter), member 7 protein_coding Danio_rerio
ENSG00000112473 SLC39A7 solute carrier family 39 (zinc transporter), member 7 protein_coding Homo_sapiens

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