C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (zinc transporter), member 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112473 SLC39A7 9606 + 6:33200445-33204439 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374675 SLC39A7-002 33200826-33204439 protein_coding
  ENST00000374677 SLC39A7-001 33200873-33204439 protein_coding
  ENST00000444757 SLC39A7-003 33200445-33202692 protein_coding
  ENST00000463972 SLC39A7-005 33202255-33204439 processed_transcript
  ENST00000617885 SLC39A7-201 33200961-33204436 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374675ENST00000374677ENST00000444757ENST00000463972ENST00000617885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374675 16.157±0.00 12.188±0.00 4.951±0.00 6.689±4.23 15.713±9.24 12.407±2.24 4.693±3.32 19.094±13.07 17.740±9.83 17.461±12.32 4.435±1.93 9.418±3.61 42.420±7.57 12.416±0.00
ENST00000374677 26.092±0.00 20.131±0.00 3.123±0.00 7.321±5.22 13.135±6.24 10.417±2.47 6.876±4.76 16.441±13.50 7.841±5.68 8.481±2.86 N/A 19.923±10.30 23.572±4.27 17.630±0.00
ENST00000444757 N/A N/A 5.822±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.307±0.00 N/A
ENST00000463972 16.871±0.00 22.924±0.00 N/A 13.128±0.00 17.021±0.00 14.710±0.00 N/A 27.444±0.00 28.538±0.00 15.225±0.00 9.969±0.00 31.330±11.50 42.349±0.00 16.790±3.30
ENST00000617885 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.842±0.00 N/A 24.840±6.44 49.963±7.78 16.874±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PH CIL_0001PH_0002 CGP 6:33162681-33200688

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006829 IEA zinc ion transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 TAS:IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036388 slc39a7 solute carrier family 39 (zinc transporter), member 7 protein_coding Danio_rerio
ENSMUSG00000024327 Slc39a7 solute carrier family 39 (zinc transporter), member 7 protein_coding Mus_musculus

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